Silurus meridionalis (southern catfish): 124394941
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Entry
124394941 CDS
T08004
Symbol
paf1
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124394941 (paf1)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
124394941 (paf1)
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Gene cluster
GFIT
Motif
Pfam:
Paf1
CGI-121
Motif
Other DBs
NCBI-GeneID:
124394941
NCBI-ProteinID:
XP_046719409
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Position
12:2070712..2081380
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AA seq
521 aa
AA seq
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MAPTIQTQAQREDGHRSSSHRTVPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQHRFVQ
YKATSLEKQHKHELLTEPDLGVTIDLINPDTYRIDPNILLDPADEKLLEEEIQAPTSSKR
SQQHAKVVPWMRKTEYISTEFNRYGVSNDKVEVKIGVSVKQQFTEEEIYKDRDSQISAIE
KTFEDAQKNIAQHYSKPRVTPVEVLPVFPDFKMWINPCAQVIFDSDPAPKDVPSSAGVDM
MSQAMIRGMMDEEGNQFVAYFLPNEDTLRKRKRDVEEELDYMPEELYDYKIAREYNWNVK
NKASKGYEENYFFIFRDGDGVYYNELETRVRLSKRRAKAGAQSTTNAVLVCKHRDMNEKE
LEAQEARRAQLENHEPEDEEEDLDKDTQDSGDEKDKGSESENSDSGSDQDEEDEGRGENQ
DDEEEEEEEEERKASGSESGEDRHARDEEEIFGSDDDDSEDEDEGGARRRRRSEDEDAEE
EGGRASGSASPAHSSSGQSEGGGGQSGSDRGSDSSNASDSE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaacgattcaaactcaagcgcagcgcgaggacgggcatcggagctcgtcacac
agaaccgtccctgagaggtctggtgttgtgtgccgggttaaatactgtaacagcctccct
gacatccccttcgaccccaagttcatcacatatcccttcgaccagcaccggtttgtgcag
tataaagccacctcactcgaaaaacaacacaaacatgagctgctcaccgaaccagacctg
ggagtgaccattgacctcatcaaccccgacacctaccgcatcgaccctaacattttgtta
gatcctgcagatgagaagctcctagaagaggagatccaggcacccaccagctccaaaaga
tcccagcagcatgcgaaggtggtcccgtggatgaggaagactgagtacatctccacagaa
ttcaaccgatatggtgtttccaacgacaaagtggaggtcaagattggtgtgtctgtgaag
cagcaattcacagaagaagagatctacaaggacagagacagtcagatctctgccatcgaa
aagaccttcgaagatgctcagaagaatatcgcccagcactacagcaaacccagagttaca
cctgtggaggtgttgcccgtcttccccgatttcaagatgtggataaacccgtgtgcgcag
gtcatcttcgactccgaccccgctcctaaagacgtccccagctctgcgggggtagacatg
atgtcccaggctatgatcagaggaatgatggacgaggaagggaaccagttcgtggcgtac
ttcctgcccaacgaagatacgctgcgtaagcggaaacgagatgtggaggaagaactggat
tacatgcctgaggagctttatgactataagatagcgagagagtataactggaacgtgaag
aacaaagccagcaaaggctacgaggagaactacttcttcatcttcagagacggagacggc
gtttactataacgagctcgagaccagggtgcgtttgagtaagagacgtgcgaaggccgga
gctcagtccaccaccaatgctgtgctggtctgcaaacaccgagatatgaacgagaaagag
ctggaagcacaggaggctcgcagagctcagctggagaaccacgagccagaggatgaggag
gaagacctggacaaagacacacaggactctggtgatgagaaggacaaaggcagcgagagc
gagaactcggacagcggctccgaccaggacgaagaggacgaggggcggggtgagaaccaa
gacgacgaagaggaagaggaggaggaagaggagaggaaggcgagcgggagcgagagcgga
gaggaccggcacgctcgcgacgaggaggagatcttcggcagcgacgacgacgacagcgag
gacgaggacgagggcggagctaggaggaggaggcggagcgaggacgaggacgctgaagaa
gagggaggaagggcgagcgggagcgcttcacccgcccatagcagcagcggccaatcagag
ggagggggagggcagagcggcagcgacaggggctcagactccagcaacgccagcgacagc
gaatga
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