Silurus meridionalis (southern catfish): 124395008
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Entry
124395008 CDS
T08004
Symbol
rhbdd1
Name
(RefSeq) LOW QUALITY PROTEIN: rhomboid-related protein 4
KO
K09651
rhomboid-related protein 4 [EC:
3.4.21.105
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124395008 (rhbdd1)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
124395008 (rhbdd1)
Peptidases and inhibitors [BR:
smeo01002
]
Serine peptidases
Family S54: Rhomboid family
124395008 (rhbdd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhomboid
Motif
Other DBs
NCBI-GeneID:
124395008
NCBI-ProteinID:
XP_046719509
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All DBs
Position
12:complement(3562228..3570487)
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AA seq
326 aa
AA seq
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MRTRQRGSHLGLLLLASQVFQLGIDNIPPATLATLGLNVYLFLFPVKPLLQTCVSVQQAY
WAADWHRLLLSPFHHVDDWHLYFNMVSFLWKGVNLERRLGTAWFAYLLSVFSLLTGLVYL
LLEAALTELLDDFSFSMQCAVGFSGVLFGLKVVNNYYNPGGSTYIMGLPVAKRYACWVEL
VLIHIMNPGTSFVGHLAGIVVGLLYTXGPLKTLMETCAGFVSGHGNYGRPRTYYNSSGYS
GYRMPYTPNRSPYDGQGLYSRVAPSAPPQHLYTAGLSEREQYEAAIIASLQDQGRRPQSR
PQYGFNANSEPNTEEIRRRRLQMFES
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccagacagcgaggctctcatcttggcctgctcctgctggcgtctcaggtgttt
cagctcggcatagacaacatccctccggctacgttagcgacgcttggtctgaatgtctac
ctcttcctgtttcctgtcaagcccctcttacagacgtgtgtgagtgtacagcaggcctac
tgggctgcggactggcatcgcctcttgttgtcccctttccatcatgtcgacgactggcac
ctctacttcaacatggtctccttcctctggaaaggcgtcaacctggagcgcaggctcggc
accgcctggttcgcctacctcctgtccgtcttctccctgctcaccggattggtctatctg
ctcctagaggcggcgctgaccgagctcctggacgatttctcgtttagcatgcagtgcgcc
gtgggcttttcaggtgttctcttcggactgaaagtcgtcaacaattattataacccgggt
ggatccacgtacatcatggggcttcctgtagccaaacgctacgcctgctgggtggagcta
gtcctcattcacataatgaacccagggacctcatttgttgggcacctggctggcattgta
gtggggcttctttacactnacggtccccttaaaacactaatggaaacgtgtgcaggtttt
gttagtggtcatggaaactacggcaggcctcgcacctattataactcttcggggtatagc
gggtatagaatgccctacacaccgaacagatcgccctatgatggccagggtctctatagc
cgagtcgcgccatcggcaccccctcagcacctgtacacagccggtctgtcggagcgggag
cagtacgaagcagccattattgccagcctgcaagaccaaggacgccgccctcagagtcga
ccgcagtacgggttcaacgccaactccgagcccaacacagaggaaatccgtcggcgccga
cttcagatgtttgagagttaa
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