Silurus meridionalis (southern catfish): 124395041
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Entry
124395041 CDS
T08004
Symbol
ptgir
Name
(RefSeq) prostacyclin receptor
KO
K04263
prostacyclin receptor
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124395041 (ptgir)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
124395041 (ptgir)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
smeo04030
]
124395041 (ptgir)
G protein-coupled receptors [BR:
smeo04030
]
Rhodopsin family
Lipid
Prostacyclin
124395041 (ptgir)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7TM_GPCR_Srbc
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
124395041
NCBI-ProteinID:
XP_046719554
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Position
12:complement(16047163..16077273)
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AA seq
365 aa
AA seq
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MMNPNNTCENFTRINVHKNPGNLVVSAIMFLAGVVGNLLALAILGVHQKERRTKSSVFCI
LVTGLAVTDLAGTCLLSPPVFVCYARATSLVGLTGDMHLCISFAFAMTFFGLASMLILCA
MAVERCLAISHPYFYSKHVRRHFAKVALFLIYLFSGAFCLLPIFGIGRYKQYCPGTWCFI
KMEAVGEDEDEERRTLAFSLSYSLLMALLIAVVFVCNGSVIVSLCRMHRSQITRRGSVVS
TGRKKRLSTWFGQGEEEMDHLAMLASMTIIFVICSLPLTIFGFVNAISPVGNDQQNLLAF
RFSAFNPVVDPWVFIIFRKSIFQHVRSFLHCRFSKAAVKQTTQDGLSHRLESTALQSKSF
SGVPQ
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatccaaacaatacatgtgaaaatttcacgcgcattaatgtgcacaagaaccct
ggaaacctggtggtcagtgctatcatgtttcttgctggcgtggtgggcaatctgctagct
ctggccattctcggggtccaccaaaaggaacggcgaaccaaatcctccgttttctgcatc
cttgtaacaggactggctgtgacggatctggcagggacgtgtttgcttagcccaccggtg
tttgtgtgctacgcgcgtgctacctccctggtgggcttaactggtgacatgcatctgtgc
atctcttttgcctttgccatgactttctttggcctggcgtccatgctgatcctgtgtgcc
atggcagtggagcggtgcctggccatcagccacccgtatttctactccaagcatgtacgg
cgccactttgccaaagttgcactttttcttatctaccttttttcaggtgccttctgcctg
ctgcccatctttggcattggccgctataagcaatactgccctggtacatggtgctttatt
aaaatggaggctgtgggtgaggatgaagacgaggagagacgcacactcgccttctccctc
tcttattccctgttaatggccttgctcattgccgttgtctttgtctgtaatggctcagtc
atcgtcagcctgtgccgcatgcaccgcagtcagatcacacgccgaggttctgtggtctcg
acagggcgcaagaaaaggcttagcacctggtttggccagggtgaggaagagatggaccat
ctggcgatgctggcctctatgactatcatcttcgtcatttgctccttgcctctgactatt
tttggcttcgtcaatgccatcagccccgtaggaaacgaccagcagaaccttcttgcattc
cgcttctctgcattcaaccccgtggtggatccctgggtcttcatcatcttccgaaagtca
atcttccagcatgtgcgttcatttttgcattgtcgcttcagcaaggcagcagtgaagcag
acaacacaagatggcctctcacatcgtttagagtccaccgcactccagagcaaaagtttc
tctggtgtccctcagtga
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