Silurus meridionalis (southern catfish): 124395087
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Entry
124395087 CDS
T08004
Symbol
capns1b
Name
(RefSeq) calpain small subunit 1b
KO
K08583
calpain, small subunit 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124395087 (capns1b)
Peptidases and inhibitors [BR:
smeo01002
]
Cysteine peptidases
Family C2: calpain family
124395087 (capns1b)
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GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
ODAPH
Motif
Other DBs
NCBI-GeneID:
124395087
NCBI-ProteinID:
XP_046719649
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All DBs
Position
12:complement(13393540..13399018)
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AA seq
218 aa
AA seq
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MFAIKGIVGGLINVVSNIDPGMFTPSAPPPTRRPISTVQAAANESDEDRQFRKVFQQLAG
DDMEVSPNELMDILNKILTKHADLKTDGFSIESCRSMVAVMDCDSSGKLGFTEFKYLWNN
IKRWQNIYKTYDADRSGTISATELPGAFNAAGFPLNQQLLQMIVRRYSDENGDMDFDNYI
GCLVRLDAMCRAFKTLDKDNDGQVKVNIKEWLQLTMYS
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaatcaaaggaattgtaggaggccttataaatgttgtgagcaatattgatcct
ggcatgtttactccatctgctccacctcctacccgaaggcccatatcaacagtccaggct
gcggcaaatgagagcgatgaagacaggcagttccgcaaagttttccagcagctcgctggg
gatgacatggaagtaagccctaatgaactgatggatattctcaacaagattctgacaaaa
catgctgacctaaagactgatggtttctcaattgagtcttgcagaagcatggtagcagtg
atggattgtgacagctctggaaagttgggcttcactgaattcaaatacctgtggaacaat
atcaagaggtggcagaacatctataagacatatgatgcagatcgttctggaacaattagc
gccactgagctgcctggtgcttttaacgctgcagggtttccactaaatcaacagctccta
cagatgatcgtgcgcagatacagtgatgaaaacggcgacatggactttgacaactatatt
gggtgcctggtgcgactggatgcaatgtgccgtgcttttaaaacacttgacaaggacaat
gatggtcaagtcaaagtcaacattaaggagtggctgcagttgactatgtactcataa
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