Silurus meridionalis (southern catfish): 124395108
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Entry
124395108 CDS
T08004
Name
(RefSeq) paired mesoderm homeobox protein 1-like
KO
K09329
paired mesoderm homeobox protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124395108
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
124395108
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
DUF6210
Motif
Other DBs
NCBI-GeneID:
124395108
NCBI-ProteinID:
XP_046719671
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Position
12:complement(22285881..22297716)
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AA seq
236 aa
AA seq
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MTSGYAAHVMDRAITAANLDHFHAKKNFSVSHLLDLEDAREMAGAQAEESSAEAGTGSLE
SPGLTSGSDTAQQDNEQLNTEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVRED
LARRVNLTEARVQVWFQNRRAKFRRNERALLANKNASLLKSYSGDMTSVEQPIVPRPAPR
PSEYLSWGSSPPYSAMASYSPSCANNTTQGVNMANSIANLRLKAKEYSMNQVPTVN
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgacttctggctatgcagcgcatgtgatggacagagcgatcaccgcggccaacctggac
catttccacgccaagaagaacttctccgtgagccacctgctggacctggaagacgcgcgg
gagatggccggagctcaggccgaggagagcagcgctgaggcgggcacaggaagcctggag
tctccggggctcaccagcggcagcgacactgcacagcaagataacgagcagctaaacaca
gaggagaagaagaagaggaagcagaggagaaacaggaccacgtttaacagcagtcagctg
caggcgctggagcgggtgtttgagaggacgcattacccagatgccttcgtcagggaggac
ctggcacgcagggttaatctcaccgaggctcgcgtacaggtgtggtttcagaacagaagg
gctaagttcagacgtaacgagcgagcgctgctggcaaataaaaatgcctcgctgctcaaa
tcctactccggagacatgacatccgtggagcagccgatcgtaccacggccggctccgagg
ccaagcgagtacctgtcctggggaagctcacctccatacagcgccatggcctcctactca
ccatcatgtgccaacaacacaacgcagggcgtgaacatggccaacagcatcgccaacctg
aggctgaaggccaaggagtacagcatgaaccaggtgccaaccgtcaactga
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