Silurus meridionalis (southern catfish): 124395347
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Entry
124395347 CDS
T08004
Symbol
ehd2b
Name
(RefSeq) EH domain-containing protein 2b isoform X1
KO
K12469
EH domain-containing protein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124395347 (ehd2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124395347 (ehd2b)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
124395347 (ehd2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
Dynamin_N
EH
EHD_N
MMR_HSR1
EF-hand_1
AAA_22
EF-hand_7
AAA_16
Septin
Motif
Other DBs
NCBI-GeneID:
124395347
NCBI-ProteinID:
XP_046719731
LinkDB
All DBs
Position
13:18046732..18054541
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AA seq
549 aa
AA seq
DB search
MSRWGRKNVKKAPEVIRTVTEGLKSLYRKKLFPIEEYYGFHDFHSPSLEDADFDNKPMVL
VVGQYSTGKTTFIKYLLEQEVPGSRVGPEPTTDCFTAIMHGDMEGIIPGNALIVDPNKPF
RKLNPFGNTFLNRFQCAQLPNQVLESISIIDTPGILSGAKQRVSRGEANTKGYDFPAVLR
WFAERVDRIILLFDAHKLEISDEFSEAISALKGNEDKLRVVLNKADMVGTQQLMRVYGAL
MWSLGKVFGTPEVLRVYIGSFWSEPLMVPDNRKLFELEEEDLFADIQNLPRNAAVRKLND
LVKRARLVRVHAHIISYLKQEMPSVFRKDNKKKHLIHQLPVIFSKIQLQHHISPGDFPDC
AKMQELLEGQDFTKFKSLKPNMMAMLDELLSSDIAKLMPLLRQEEIESGGQPGVQGGAFL
GTRAGPFMEGDPFGEKVEDEAEDGEVNEDWIVTKDKPKYDEIFYNLAPNEGKLSGTKAKD
WMVSTRLPNSVLGRIWKLSDVDRDGMLDDEEFALASHLIEVKLEGHGLPPELPARLVPPS
KRRQKGSDA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctgggggaggaagaatgtcaagaaagcccctgaagtgatcaggacggttacg
gaggggttgaagtcactgtatcgcaagaagctttttcctattgaggagtattatggtttt
catgactttcactcaccaagtctggaagatgctgactttgataacaaacccatggtgcta
gtggttggtcagtactccacaggaaagactacattcatcaaataccttctggaacaagag
gtgcctggaagccgggtgggtccagaaccaaccacggactgcttcactgccatcatgcat
ggtgatatggagggaataatccctggaaacgctctcatagtagaccccaacaagcctttt
cgcaaactcaaccccttcggaaacactttcctgaacagattccagtgtgcgcagctgccc
aaccaggtcctggagagcatcagtattattgacacccctggcatcctgtcgggagctaag
cagagagtgagccgaggtgaggccaatactaaaggctatgacttcccagctgtcttgcgt
tggtttgctgaacgagtggaccgaattattctcctttttgatgcccacaaactggagatt
tctgatgagttttcagaggccataagtgctttgaagggcaacgaggacaaactacgcgtg
gtgcttaacaaggctgatatggttgggacgcagcagctgatgcgagtatatggtgctctc
atgtggtccctgggaaaagtgtttgggacccctgaagtgctaagagtatatattggctca
ttctggtctgaacctctcatggttccagacaaccggaagttgtttgaattggaagaggaa
gatctttttgctgacatccagaacctgccacgaaatgcagctgtacgcaagctgaatgat
ctggtcaagagagctcgtctagtgagggttcatgctcacataatcagttacctgaaacaa
gagatgccttctgtcttcagaaaggacaataagaaaaaacatttgatccaccagctgcca
gtcatcttctccaagatccagctgcaacatcacatatcccctggagattttcctgactgt
gccaagatgcaggaactcctggaaggtcaagacttcaccaaatttaagtccctgaaaccc
aacatgatggctatgctggatgagctgttgtccagtgacattgccaagctgatgcctctc
cttcggcaagaggagattgagtcaggaggtcagcctggagtccaaggtggggctttcctg
ggcacccgagcaggaccctttatggaaggtgatccattcggtgagaaagttgaagatgaa
gctgaggatggagaagtgaacgaggactggattgtgactaaggataagcccaagtatgat
gagatcttttacaaccttgcacctaatgagggcaagctgagtggcaccaaagccaaagac
tggatggtgagcacacggttgcccaattctgtgctgggtcgcatatggaagttgtcagat
gtagatcgtgatggcatgttggatgatgaagaatttgccctggctagccatctgattgag
gtgaaacttgaaggccatggcctgccacctgaattacctgctcgtttggtgcctccttct
aaacgcagacaaaaaggatctgatgcttag
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