Silurus meridionalis (southern catfish): 124395350
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Entry
124395350 CDS
T08004
Symbol
zgc:162879
Name
(RefSeq) ras and EF-hand domain-containing protein
KO
K17199
Ras and EF-hand domain-containing protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
smeo04031
]
124395350 (zgc:162879)
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124395350 (zgc:162879)
GTP-binding proteins [BR:
smeo04031
]
Small (monomeric) G-proteins
Rab Family
Rab45
124395350 (zgc:162879)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
EF-hand domain-containing proteins
Other EF-hand domain-containing proteins
124395350 (zgc:162879)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
EF-hand_7
Arf
EF-hand_1
EF-hand_6
EF-hand_5
GTP_EFTU
MMR_HSR1
Dockerin_1
Gtr1_RagA
EF-hand_8
AAA_25
EF-hand_10
EF-hand_9
Motif
Other DBs
NCBI-GeneID:
124395350
NCBI-ProteinID:
XP_046719734
LinkDB
All DBs
Position
13:complement(17916228..17935016)
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AA seq
669 aa
AA seq
DB search
MDMADLRKLFSACDVNKSGRIEYEDFSEVCRELSVPVGEIRTLFQRFDVDGDGCINYTDF
CSSFHEASGSMNLAALEHIGESRASAWDEFENTLDGDVAYYLGRLWDPLSEFYEQIHETS
DKLLLQQYEELIKVLVTESKEHRVETDQLESSLRRTEEMVSTQLSEIEEDLQQQLNYKEL
TVREEEQKKTEGAIAMLQLKHENELLDLQSAIEKLTQEEAELTNPKEEVIKLRTKIREVT
QENEDFRKSLLKAQMNISVLQVELDKLKNAYADEKLQHESESNELKKMVIQYQSYAEHFE
LLQEMNKNLFDSNDGLRSALAKDSLSSKEQLSSKSKMPPRRLKPLWQSTINQSSFANEED
GMIAVPSKEKLSLVEHWAEKYLDSGISLQTDTDRMSGCNYDSDESNDSDDTTHHSSSIIP
SEIEMSDFKSEMNLSVTSSRVSLLTSSLRRRLSAFPTKQTEVEAFDSGESVPMYRLVLAG
DAGSGKSSFLLRLSLNEFRGDMQTTLGVDFQMKKMLVDGEKTNLQIWDTAGQERFRSIAK
SYFRKANGVLLLYDVTSESSFLNVREWIEQIQESTDGSIPLCLIGNKVDLRVTREVKNCV
SPIHGEKLARTYNALFCETSAKEGTNVVEAVLHLAREIKKHTKLRRQSVSQVELTLNSGK
KALSNCCGL
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggatatggcagaccttcgtaagttgttttccgcctgcgatgtcaacaaatcgggaaga
atcgagtacgaggatttcagtgaggtttgccgagagctcagtgttcctgtcggggagata
aggactttattccaaaggtttgatgtggatggagacggttgtattaattacaccgatttc
tgttcgagtttccacgaagcgtctggaagcatgaatctggccgcgttggagcacattgga
gaaagtcgagcgagtgcttgggatgagtttgaaaatactttggatggagatgtggcctac
tatttgggcaggttatgggatccgttgagtgagttttacgagcagattcatgaaacctct
gacaagcttctgcttcagcaatatgaggagctgattaaagttttagtgacagagagcaaa
gaacatcgggtggagactgatcagttagagtccagtctgagaaggacagaggagatggtg
agcactcaattatcagagattgaggaggatttacagcagcagctaaattacaaagagttg
actgtccgagaggaggagcaaaagaaaacggaaggggccatcgcaatgctgcagctaaag
catgaaaatgaattgctagacttacaatcagccatagagaagcttacgcaggaggaggca
gagttgaccaaccccaaagaagaggtcatcaaattaagaacaaaaatccgagaggttact
caggaaaacgaggacttcagaaaatctcttttgaaagcccaaatgaacatctctgtcctg
caggtagagttggacaaacttaaaaatgcctatgctgatgaaaaacttcagcatgaaagt
gaaagtaatgaactgaaaaagatggtgatccagtaccagtcttacgctgaacattttgaa
ctcctccaggaaatgaacaaaaacttgtttgatagcaatgatgggttacgatctgctctt
gccaaggacagtctttcttccaaagagcagctttcctcaaaaagcaaaatgccacccagg
agattgaagccactgtggcagagtacaataaatcagagcagctttgctaacgaggaggac
ggcatgattgcagtgccatccaaggagaaactctcacttgtggagcactgggcagagaag
tatctagacagcggcatttccttacagacagacacagacaggatgtcaggctgcaattat
gatagtgatgagagcaacgattctgatgatactactcatcacagctcttcaattattcca
tctgaaattgagatgtcagattttaagtctgagatgaatttgtcagtgacttccagcaga
gtcagcttgttaacttcatccctgagacgtcgactgtcagcttttcctacaaagcaaact
gaagtggaagcgtttgattctggtgaatctgttccaatgtaccgcttggtgctggcaggg
gatgcagggtctggaaaatccagcttcttgctgcgtctcagtctaaatgagttcagagga
gacatgcagaccacactgggcgttgactttcaaatgaagaaaatgcttgtggatggagaa
aagacaaaccttcagatatgggacactgctgggcaggaaaggtttcgcagtattgccaaa
tcgtacttccgcaaagcaaatggggtactacttctttatgacgtcacttcagagagcagc
ttcttgaatgttcgagagtggattgagcagattcaggaatccacagatggcagcatcccg
ttgtgtcttattggaaataaagtggacttgagagtgactagggaagtgaagaactgtgtg
agtcccatccatggcgaaaagcttgctaggacttacaacgccttgttctgtgagacgagt
gccaaagagggcaccaatgtagtggaggcagttctgcatttagcaagagagatcaaaaaa
cataccaaactgaggaggcagtcagtgtcacaagttgagttgaccctaaacagtgggaaa
aaggcactgagtaactgctgtggactttaa
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