Silurus meridionalis (southern catfish): 124395364
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Entry
124395364 CDS
T08004
Symbol
tnfaip2b
Name
(RefSeq) tumor necrosis factor alpha-induced protein 2 isoform X1
KO
K19989
tumor necrosis factor alpha-induced protein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124395364 (tnfaip2b)
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
124395364 (tnfaip2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec6
DUF3644
Motif
Other DBs
NCBI-GeneID:
124395364
NCBI-ProteinID:
XP_046719754
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All DBs
Position
2:19204771..19209294
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AA seq
660 aa
AA seq
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MACFLHCRKLLDCFSSRQRDGGAMTVGSASPIDKKLSKSRFSKLKANLPFFRRNSHVHAH
THVDQNPSEVLLTFQQNLEQNQFSVAGKQLICREERLFALKQEGVESNKCMLEEEEEDAE
EKLKQNFKDLLTKVMSTVERSLDVQTNEEKEFLKEAILAIDQEEEQDRRWDGVGENERPP
WRPRCCRQDHDRLIQDMVIQRMEKAQLDSNVNITSSIKKEITAKAKQLKEDLLKIVRNVR
SCYPNENVCQLYAELYHQLFSASLMEIAKFGIVDDDCIYVLQWVNSLYPQILKYNELSEV
IKHEDLKPVLPDDVLEPLEKQFLFSKESELQTLCQTVINREKNYIPELRDDCYISHLATD
IIQCVNALLKLSRDVLGSWSKTQRITHPIKQFLINYHHFLEKVIEENQANADATLKANLQ
CILELRNYIMMNLEPFPQDIRNDCIDILDQTRDTCHRYFTNPIQKDLKWLYFKLGTKEWL
KDNEYVCGELLKGVQRHIDEIRLLNEASFKDLVSKLHEQVLAEYVRKMMKKKTRFKDQQK
QKLAAERLVTNSQKIHTLFTEAGSNMKGLEKILPSLAELLTIQDPHCIVLHLATLSKTYP
DLSEAHVSAWLYLKATLSASDLKDIKKTFAICNAQNLESAVDGKEPLYSSRSFFSKVVIR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcatgctttttacactgccgtaagttactggactgttttagttccagacaacgagat
ggcggagcaatgactgttggatcggcatcccccatagacaagaagctctccaagtccaga
ttttccaaactgaaagcaaacctgccatttttcagaaggaattcccatgttcatgcccat
acccatgttgaccaaaacccatcagaggttctgttaacttttcagcagaacctagagcag
aatcagttttcagtagcagggaagcagctgatatgtcgagaggagcgtttgtttgcactg
aaacaagaaggcgtggaatccaacaaatgcatgttggaggaagaggaagaagatgcggag
gaaaaactgaaacaaaactttaaagacttgttaacgaaagtcatgtcaacagttgagaga
tctcttgatgttcaaactaatgaagagaaagaatttctaaaagaggcaatcttagccata
gaccaggaggaggagcaggacaggagatgggatggggttggagaaaatgagcgtcctcca
tggaggccgaggtgttgcagacaggatcatgatcgcctgattcaggatatggttatacag
cggatggagaaggcacagctagattcaaatgtcaacattacatcttcgattaaaaaggag
atcactgccaaggcaaaacaactaaaagaagacctgctcaaaattgtaagaaatgtgagg
agctgctacccaaatgagaacgtgtgccaactatatgctgaattataccatcagcttttt
agtgccagtctcatggaaattgctaaatttggaatagttgatgacgactgcatatatgtg
ctacagtgggtgaacagtctttaccctcagattctaaagtataatgagctttcagaggta
attaaacatgaagatctgaagccagtactccctgatgatgtccttgagccattggagaag
cagtttttgttcagtaaagagagtgagctgcagacattgtgtcaaacagtcataaacaga
gagaagaattatattcctgaactgagggatgattgctacataagccatctggctactgat
ataattcagtgtgtcaatgctcttctaaaattatctagggacgtgctgggctcttggtca
aaaacccaaagaatcacacacccgataaaacaatttcttattaattaccaccatttcctt
gagaaagtgattgaggaaaatcaggcaaatgctgatgccacattgaaggccaacctacag
tgtatcctagagctcaggaattacattatgatgaatctagagcccttcccccaagacatc
aggaatgactgtatagatattctggatcagacaagagacacatgccacagatactttacc
aatccgatccagaaggatctgaagtggctatacttcaaactgggtaccaaagaatggctt
aaagacaatgaatatgtgtgcggtgaattgctcaaaggggtgcaaagacacattgatgaa
ataagacttctaaatgaagcatcctttaaggatttggtcagcaagcttcatgaacaagtt
ttggctgagtatgtgagaaaaatgatgaagaagaagaccaggtttaaagatcagcagaaa
caaaaactggcagctgaaagactagtcacaaatagtcagaaaatacacactctgtttacc
gaggctgggtcaaacatgaagggactggaaaagatcttaccaagtctagctgaactgctg
acaatacaagatccacactgcattgtactccatctggccaccctctctaaaacttaccca
gatctcagtgaagcccatgtctctgcttggctataccttaaggcaactctctctgcttca
gacctgaaagatattaagaagacctttgctatttgtaatgcccagaatttagaaagtgct
gtggatggcaaggaacctctttattcaagcaggagtttcttttccaaggtagtcattagg
taa
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