Silurus meridionalis (southern catfish): 124395520
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Entry
124395520 CDS
T08004
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smeo03037
]
124395520
04812 Cytoskeleton proteins [BR:
smeo04812
]
124395520
Cilium and associated proteins [BR:
smeo03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
124395520
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
124395520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_LRWD1
LRR_NXF1-5
LRR_R13L1-DRL21
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
124395520
NCBI-ProteinID:
XP_046720024
LinkDB
All DBs
Position
13:4574649..4619553
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AA seq
738 aa
AA seq
DB search
MDAFKATPSRQDSRLAMYGKTLHIPVLGFTKASPGAAHALTPPPVTIKRGKGKRVNHSAE
LTYTHSKAPVVLSPVGDPVAPNNRSAAGFPVDFSCRNDNPVILDRLDFDRRGLMELPNLV
GMNKLRFLNLQHNLISHLPHLSHLRHLVFLDLYDNHLIDMTAVSPLCSLRVLMLGKNRIQ
RVCGLDSLKKLDVLDLHKNQINRIENVSHLEELRVLNLAGNCISRVENLQGLESLIELDL
RHNRITSVTEVDQLPSLQRLFLSGNSISSFDDLACLGDSCSLSELTLDGNPVAQESCYKQ
TALRCVLPLRLLDMKRITEEDRRAANLLARKEDEKKRESHKQAAHKEKRRLAIRNAAQQW
EESRSFLELPAQNGSKEELSPENTPAHSPGQTNGIAQEHSPDDLRRDRGSPLTVPERPAG
GSDTKLRSNSRPNSPRDPKLQEAGGASVQSLSLSESHVAELDGETVRLFGPGALDTLERG
WGVQTASAVNIIAFRYIQFDSIVPMLPRIRLKFPNLTHLIFMETNITRLLQLAALAQVKR
LEQVTIDPEGNPVVSLTLWRSFIIYRLNHLNLQRINGTEVTMNDVMAAERIFGTLGHVAS
TETPHCRLLLLLEESRKRQLQFLLEGRVRRFGLSPEELRENGKLLGESMSRALFNYHSKD
SSSESPEESSSEVLERSSAVDQYLRGLAHAVSSTSVKREAFHKLWPTMFVEMVRDCVLKT
RDAAACARTCLDTLSDAK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggacgccttcaaagctactccatcgaggcaagactccaggctggctatgtatggtaaa
actctccacataccagtcctgggtttcacgaaagcgtccccaggggcggcgcacgcccta
acgccccctccagtgactatcaagagggggaaaggaaagcgagtcaaccacagcgccgag
ctcacctacacacacagcaaggccccggtggtcttaagcccagtcggtgatccagtggca
ccgaataacagatctgctgcgggttttccagtggacttctcctgcaggaatgacaatcct
gtcatcctggatcgtctggacttcgatcgtcgtggcctgatggaattgccaaacctggta
ggaatgaataagctccgcttcctcaacctgcagcacaacctgatctctcacctcccacac
ctgtctcacctacgacacctcgtcttcctcgatctctacgacaaccacttgattgacatg
acggccgtatcccctctttgctcccttagggtgcttatgctcggcaagaacaggattcag
agggtatgtggtctggacagcctgaaaaagcttgatgtgctggacttgcataaaaaccag
atcaatcggatcgaaaacgtgtctcacctggaagaactccgagtgctaaacctagcagga
aactgcatctccagggtggagaatctgcagggtctggaatctctgatcgagctcgacctc
agacacaaccgcatcacgtctgtaacggaggtggaccagctgccctctctccagcgtctc
tttctcagcggtaacagcatcagcagttttgatgacctggcctgtctgggagactcgtgc
tctctgagtgagctcaccctggatgggaatcctgtagctcaggagtcatgctacaaacag
acagcgctgcggtgcgtgcttccactccgactgctggacatgaagcgcatcacagaggag
gacagacgcgcagcaaaccttttagcgcgaaaggaggatgagaagaaacgtgagagccac
aagcaagccgctcacaaggagaagcgccggctggccatccgaaatgcagcgcaacagtgg
gaggagtcaaggagcttccttgagctgccagcacagaacggctctaaagaggagctgagc
ccagagaacaccccggcccacagcccaggacagaccaatgggatcgctcaggagcactca
cccgatgacctcagacgggacagagggagtcctctaactgttcctgagcgtccagcaggg
ggcagtgacactaaattgcgttcaaacagtcgccccaacagccctcgagaccccaaactc
caggaggcagggggcgccagcgtgcagagtctgtctctgtctgagagccacgtggccgag
ctggatggtgagacggtgcgtctgttcggtccgggggctctggatactctagagagaggc
tggggagtgcagacagccagcgcagtcaatatcatcgccttccgctatatccagttcgac
agcatcgtgcccatgctgccacgcattcgcctgaaattccccaatctcacgcacctgatc
tttatggagactaatataacacggctgctacagttagccgctctggcgcaggtaaagaga
ctggaacaggtgaccattgatccagagggaaaccctgtcgtgagtctgactctgtggcga
tcctttatcatatacagactcaaccacctgaacctgcagaggatcaatggcacagaggta
actatgaacgatgtcatggctgccgagcgcatttttgggactctgggtcacgtggcttcg
acggaaacaccgcactgccgactgctcctactgctcgaggagtctaggaagcggcagctg
cagttcttgctggagggccgagttcgcaggtttggattgagccctgaagagctgagggaa
aacgggaagctgttgggggagagcatgagtcgagcactttttaactaccacagcaaagac
tccagctctgagagtccagaggagagcagcagtgaggtgctggagcgcagctcggcggtg
gatcaatacctgagaggactcgcgcatgccgtgtccagcaccagcgtgaaaagagaagcc
ttccacaagctctggcccaccatgttcgtagagatggtgagggactgcgtgctcaagacc
agggacgcagcggcgtgtgcgcgcacctgcctcgacacgctctccgacgccaaatga
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