Silurus meridionalis (southern catfish): 124395572
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Entry
124395572 CDS
T08004
Symbol
ddx11
Name
(RefSeq) ATP-dependent DNA helicase DDX11
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124395572 (ddx11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124395572 (ddx11)
Enzymes [BR:
smeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124395572 (ddx11)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
124395572 (ddx11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ResIII
DEAD
PhiCb5_coat
Motif
Other DBs
NCBI-GeneID:
124395572
NCBI-ProteinID:
XP_046720139
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All DBs
Position
13:26267586..26281537
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AA seq
902 aa
AA seq
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MENLDGVGRFPFPFTPYPIQERFMEELYDVLEQGKVGIFESPTGTGKSLSLICGALTWLK
DFEEKKRQEAAKLLENTVIPRAGEGGRDGAGAEVQEKNGSSADAELDWVSEFVQKRAERE
MVNKLKDEEVKRKRREDRLEMIRHNAHLKHAMKRKNNENSETEKLLQVSKQDVVSEEGPD
EDEEDGLVVADYESDEDAAPKNKLCDEDDDDDDLEEEHITKIYYCSRTHSQLAQFVHEVQ
KSPFRSTVRLVNLGSRQNLCINPEVIRLGSVQLINDRCMELQKNKHGKQNKADSEPKRRR
GAVKATCLFSGYEKMMTMRDEVLASVRDIEQLVQHGRGTHTCPYYSTRLAIPAAEVVVLP
YQSLLHAATRKASGIKLKDQIVIIDEAHNLTDTITALHSAEVSGAQLCRAHSQLSQYCDR
YRSRLKAKNLMYIKQILFVLEGLVRTLGGKVGLNPVTQSTQPGAELLTINDFLFRAQIDN
INLFKVQRYFEKSLISRKLFGFSEKYEGSGVSAHTSWMNKENRRTEGLGRFLQGLQNKAT
GPVENQGSAEERPFMASPMMLVESFLFALTSANKDGRVVMEKQACLAQSSVKFLMLNAAV
HFAQVLKECRAVIIAGGTMQPVSDFKEQLLLAAGVPNERITQFSCGHVIPPENILPIILC
AGPSGQDLEFTFQTRDTPQMMEETGRVLSNLCNVVPGGVVCFFPSYEYERRILGHWEKSG
VLQRLEAKKKIFQEPKKAGQVEQVLSEYSRCIQCCRNNGGGQTGALLFSVVGGKMSEGIN
FSDDLGRCIVMVGMPYPNIKSPELQEKMAYLDKHMPPVGGKSPGKALIENLCMKAVNQSI
GRAIRHRGDYACIVLCDRRYGRPATLRKLPEWIRSSTHTHSSFGSAFGSIRKFFLEKRQT
QH
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggagaacctggatggcgtcggtcgcttcccgtttccctttacgccgtatccgatccag
gagcgcttcatggaggagctctacgacgtgctcgagcagggcaaagtgggcatcttcgag
agtcccaccggcacgggaaagtcattgagtctgatttgtggtgctctgacatggctgaag
gacttcgaggagaagaaacgacaagaagctgcgaagctccttgagaacacagtgatcccc
agggcaggtgaaggaggaagggacggggcaggagccgaggttcaggagaagaacgggagc
agtgctgatgcagagctggactgggtttcagagtttgtgcagaaaagagcggagagagag
atggtgaacaaactaaaggatgaggaggtgaaaagaaagaggagagaggaccgactggag
atgatcaggcacaacgctcaccttaaacacgccatgaagagaaaaaacaacgagaacagc
gagaccgagaagctcttgcaggtcagtaagcaggacgtggtctcagaagaaggacctgat
gaagacgaagaggacgggcttgttgttgccgattacgaaagcgacgaagacgccgctccc
aaaaacaaactctgtgatgaagatgatgatgatgatgatctggaggaagagcacattacc
aaaatttattactgcagccgtacacactcacagctggctcagttcgtacatgaagtgcag
aagagccccttcagatccacagtccgcttggttaatcttgggtctagacagaatctgtgc
ataaatccggaggtgattcgactgggaagcgtccagctgatcaacgatcgctgtatggag
ctgcaaaaaaataaacacggtaaacagaacaaggcggactcggagcctaaacgtcggcga
ggtgccgtcaaggccacctgtttgttctcgggctacgagaagatgatgacgatgcgagac
gaggtgctggcgagcgtcagagacatcgagcagctcgttcagcacggccgggggacacac
acctgcccttattacagcacacggctggctattcctgcagctgaggtggtggtgttgcct
tatcagtccctccttcacgccgcgactcgcaaggcctcggggatcaagctgaaggatcag
atcgtgattatcgacgaggctcacaacctcacggacaccatcacggcactgcacagtgct
gaggtcagcggagcacagctgtgcagggctcactcacagctctctcagtactgcgaccgc
tacaggagccgcctgaaggccaagaatctgatgtacatcaagcaaatcctgttcgtgctc
gaggggcttgtacgcacacttggaggaaaggtgggcctgaaccctgtgacccagagcact
cagccaggggctgaactgttaaccattaacgacttcctgtttagggcacagatcgacaac
atcaacctgttcaaggtgcagcgatatttcgagaagagtttgatcagcaggaagttgttt
ggattttctgagaagtatgaagggagcggtgtgagcgcacacacaagctggatgaataag
gagaaccgcagaaccgaaggactcggacgcttcttgcagggccttcagaataaagctaca
ggtcctgttgagaaccagggttctgcagaagaaagaccgttcatggcgtctcctatgatg
ctggtggaaagtttccttttcgctctcacgagcgccaacaaagatggaagagtggtgatg
gaaaaacaagcatgtctggctcagagcagtgtaaagtttctcatgctgaatgcagcggtt
cattttgcacaagttctcaaagaatgcagggccgtcataatcgctgggggaaccatgcaa
cctgtctcagactttaaggagcagcttctcctggcagctggagttcctaatgagcgcatc
acacagttttcatgtggtcatgtgatccctccagagaatattctacccataatcctctgc
gctggaccgtctggacaggatctggagtttacctttcagaccagagacaccccacagatg
atggaggagacggggcgtgttctatccaacctgtgcaatgtggtcccaggaggcgtggtc
tgttttttcccctcttacgagtacgagaggagaattctgggacactgggagaagagcgga
gtcctccagcgacttgaagccaaaaagaagatttttcaggaaccaaagaaagcaggtcag
gtggagcaggtgctgtctgagtactccaggtgcatccagtgctgtaggaataatggaggt
ggccagacgggggcgctgttgttctctgtggttggaggaaagatgagtgaagggattaac
ttctcagatgatctgggcagatgtatcgtgatggtcggaatgccgtaccccaacatcaag
tcccctgaactccaagagaaaatggcgtatttagacaaacacatgcctcctgtaggtggc
aaaagtccaggcaaggcgttaatcgaaaacctgtgcatgaaggcggtcaaccagtcaata
ggccgggcgattcgtcaccgtggtgattacgcctgcatcgtgctgtgtgaccggcgctac
ggccgtcctgccacgctgcgcaaacttccagagtggatccgaagcagcacacacactcac
agcagcttcgggtcggctttcggcagcatcaggaagtttttcctggagaagcgacaaaca
cagcactga
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