Silurus meridionalis (southern catfish): 124395580
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Entry
124395580 CDS
T08004
Symbol
myo5aa
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Va
KO
K10357
myosin V
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
124395580 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124395580 (myo5aa)
04131 Membrane trafficking [BR:
smeo04131
]
124395580 (myo5aa)
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124395580 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124395580 (myo5aa)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
124395580 (myo5aa)
mRNA cycle factors
P-body specific factors
124395580 (myo5aa)
Membrane trafficking [BR:
smeo04131
]
Others
Actin-binding proteins
Myosins
124395580 (myo5aa)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
124395580 (myo5aa)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
124395580 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
DUF5382
HTH_17
nSTAND3
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
124395580
NCBI-ProteinID:
XP_046720150
LinkDB
All DBs
Position
13:complement(1594336..1651809)
Genome browser
AA seq
1867 aa
AA seq
DB search
MAASELYTKYARVWIPDPEEVWRSAELTKDYKQGDATLHLQLEDGKDLEYKLDPKTKALP
HLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYETLPIYG
TDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEDKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDKRYHIIGANMR
TYLLEKSRVVFQADEERNYHIFYQLCASSLLPEFKSLNLSSANEFHYTKQGRNPVIDGVD
DAKEMSTTRNAFTLLGINESYQKGLFQVLAAILHLGNVEVKDRDADSSMIPPNNSHLSVF
CDLLGVAYQDMAHWLCHKKLKTATETYIKPVPRLQAMNSRDALAKHIYAKLFNWIVEHVN
KALHSSVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKLGVLDLLDEECRMPRGSDDTWAQKLYNTHLKTCALFEK
PRMSNKAFIIQHFADKVEYQCEGFLEKNKDTVNEEQIHVLKASKFDLLVELFQDEDKVTS
PTGIVPAPGGRTRLSVKPNKGKPDQASKEHKKTVGLQFRNSLQLLMETLNATTPHYVRCI
KPNDYKLAFTFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLA
DKKMTCRNVLEKLVQDQDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRCWL
ERKKYLRMKQAAVVIQRYVRGYQARCLAKFLRRTRAAIIIQKYQRMYIQRTSYRRKRNAA
LAMQCILRAYMARQQYXALLREHKAIIIQKMVRGWLARRWYKRSLEALVYLQCCLRRMRA
KRELKKLKIEARSVEHYKKLNIGMENKIMQLQRKVDEQHKENRVLGERLSGLEHAHATES
ERLRKDLTRLRGVEEEAKNNANRVTTLQEELEKLRKDLQNTQKEKKAIEDWAKTYQDEME
KMISELKEQNDLLKNEKNDLNRLIQEQSQQWTEKLQRSLKEETSQLESDLNEERSRYQNL
LTEHLRLEEKYDDLKEEISLSLNVPKPGHRRTDSTHSSNESEYTYNSEFTEAEEGARGAE
DVTKGAALDMALFLKLQKRVTELEQEKQGLQNELDRKDEQFQRARARDDEEHKKARGAEL
EYESLKRQELESENKKLRHNLSEMHQTLAGKDGSTSAYKVLMEQLNSANEELEVRKEEVL
ILRSQLVSQKEAMQHKDEKETMTEPLHYVEDVHKLTDAKEISQAYMGLKDTNRSPLPDMR
KMNEDGELWLVYEGLKETNRLLESQLQAQRRSHEAELESLRGELHCVKEENQRQQQLLTQ
NLQLPPEARIEASLQHEITRLTNENLDFPVENPKVYKINILRRIIDLMEQLEKQDKTVRK
LKKQLKVFAKKINDLEGGQVENVSPGQMADEPIRPVNIPRREKDFQGMLEYKKEDELKLV
KNLILELKPRGVAVNLIPGLPAYILFMCLRHADYINDDQKVRALLTSIINSIKKILKKRG
DDFETVSFWLANTCRFLHCLKQYSGDEQFMKFNSSKQNEHCLSNFDLAEYRQVLSDLAIQ
IYQQLIKCMENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSVADEGTFTLDSIIRQL
NSFHSIMCHHGNDPELIKQVVKQQFYIIGAVTLNNLLLRKDMCSWSKGMQIRYNVSQLEE
WLREKNLMVCGAKETLEPLIQAAQLLQVKKKTDEDAEAICSMCNSMSTAQIVKVLNLYTP
VNAFEERVSVTFIRTIQNRLRDRKESPQLLLDTKVIYPVTFPFNPSSLALDTIQIPTSLN
LCFLNRV
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtctgaactctatacaaagtatgctcgggtgtggatccccgaccctgaggag
gtgtggaggtcagcagagctcaccaaagactacaaacagggggacgcaacgctgcatctg
cagctggaagatggcaaggatctggagtataagttggacccgaagacgaaagctctgcct
cacctgcgcaaccccgacatcctggtgggagaaaacgacctgacggctctgagttacctt
cacgaaccggccgtgctgcacaacctgaaagtgcgcttcatcgactccaaactcatctac
acttactgcggtattgtgctggtggccattaatccgtatgaaacactgcccatttatggc
acagacatcattaacgcttacagcggacagaacatgggggacatggaccctcacatattc
gctgtggctgaggaggcgtacaaacagatggccagagacgagaggaaccagtccatcatt
gtcagtggagagtccggcgctggaaagacggtttcagccaagtacgcaatgcgatacttt
gctacggttagcggttcagccagcgaggctaacgtcgaggacaaagtgctggcctccaac
cccatcatggaggccatcgggaacgccaaaaccaccaggaacgacaacagcagccgcttt
gggaagtacattgagatcggattcgataaacgctaccacatcatcggagctaacatgagg
acgtacctgctggagaagtcgcgagtcgtgtttcaggcggatgaggagaggaattatcac
atcttctaccagctctgtgcctcatccctccttcctgagttcaagagcctaaatctcagc
agtgcaaatgaatttcactacaccaaacagggacgaaacccggttattgatggagtggat
gatgcaaaggagatgtctaccactaggaatgccttcacactgctgggcattaacgagtcg
tatcagaaggggctgttccaggtcctggcggccatcttgcacctgggcaacgtggaggtg
aaggatagagatgcagacagcagcatgataccgcccaataacagccacctgagcgtgttc
tgtgatctcctgggcgtggcctatcaggacatggctcactggctgtgccataagaagctg
aagacggcgaccgagacgtacattaaacccgttcccaggttgcaggccatgaactccaga
gacgctctggccaaacacatctacgccaaactcttcaactggatcgtggagcacgtcaac
aaggcgctgcactcgtccgtcaaacagcactcgttcatcggcgtgctggacatctacggg
tttgaaacctttgagattaacagctttgagcagttctgtatcaactacgctaatgagaaa
ctccagcagcagtttaacatgcacgtgtttaagctggagcaggaggagtatatgaaggag
cagatcccctggacgctgattgatttctacgataatcagccctgcattaatctgatcgag
gccaagctgggcgtgctcgacctgttagacgaggagtgcaggatgccgagaggttcagat
gacacgtgggctcagaagctctataacactcatctgaagacgtgtgcacttttcgagaag
ccgcgtatgtctaataaagccttcatcattcagcacttcgcagacaaggtggagtatcag
tgtgagggatttttggagaaaaacaaggacacggtgaatgaggaacagattcatgttctg
aaggccagtaagttcgacctgctggtggagctcttccaggatgaggataaagtgacgagt
ccaacaggaattgttcctgcccctggggggcgcactcgcctcagcgtcaaacccaacaag
ggcaaaccggaccaggccagcaaggagcacaagaaaaccgtgggcctacagttccgtaac
tctctccagctgctgatggagaccctgaacgccacgacaccgcactacgtccgctgcatt
aaacccaacgactacaaattggccttcacgtttgacccgaagcgggcggtgcagcagctg
agggcgtgtggagtcctcgagaccatccgcatctccgcggcaggatttccatccaggtgg
acctatcaggagttcttcagccgctatcgtgtgttgatgaagcagaaggacgttctggcc
gataagaaaatgacctgcaggaatgttttggagaaactggtgcaggaccaggataagtac
cagtttggaaagacgaagatctttttccgagctggtcaggtggcgtacctagagaaactc
cgggccgataaactgcgagccgcctgcatccgcatccagaaaaccatccgctgctggctg
gagcgcaagaagtacctgcgcatgaaacaagctgccgtggtcatccagagatacgtccgt
ggataccaggcccgatgcctggcgaagtttctgcgccgaacccgagccgccatcatcatc
cagaagtaccagcgcatgtacatacagagaaccagctacaggcgcaaacgcaacgccgcc
ctcgccatgcagtgtatcctccgagcgtacatggctcggcagcagtactaagcgctgctg
cgtgaacacaaagccatcatcatccagaagatggtgcgcggctggttggcgcgtcggtgg
tataagcgttctttggaggcgctggtctacctgcagtgctgcctgcggcgcatgagggcc
aagcgcgagctcaagaagctgaagatcgaggcgaggtccgtggagcattacaaaaaactc
aacatcggcatggagaacaagatcatgcagctgcagcgtaaagtcgatgagcagcataag
gagaaccgtgttctgggtgagcgtctgagcgggttggagcacgcccacgccaccgagagc
gagcgtctgcgaaaggacctgactcgcttacgcggcgtggaggaggaggcaaagaacaac
gctaacagagtcaccacgctgcaagaagagctggagaaactgcgcaaagatctgcagaac
acgcagaaggagaagaaggccatcgaggactgggcaaagacctaccaggatgagatggag
aagatgatctctgagttaaaggaacagaatgatcttttgaagaatgagaagaacgacctg
aaccgtctgatccaggaacagagccaacaatggacagaaaagttgcagaggtctctgaag
gaggaaacatctcagctggaaagcgatttaaacgaggaaagatctcgatatcagaacctc
ctcacagagcacctgagactggaggagaaatacgacgacctcaaagaagagatctcgctc
agcttgaacgtccccaaaccgggccacaggagaaccgactccacacacagcagcaacgag
tccgaatacacctacaactctgagttcactgaggctgaggagggagcacgaggagctgag
gatgtgaccaaaggagcagcgttggacatggctttgttcctgaagctgcagaagcgagtg
actgagctggagcaggagaaacagggcctgcagaatgaactggaccgaaaagacgaacag
tttcagcgggctagagccagggatgatgaagagcataaaaaggctcgcggtgctgagttg
gagtacgaatctcttaagcgtcaggagctggagtcggagaataagaaactgagacacaac
ctgagtgagatgcatcagactttggcaggaaaagacggctccacgtcagcctacaaggtc
ctgatggagcagctaaactccgccaacgaggagctggaggtccggaaggaggaggtgctc
atcctgcgctcgcaactcgtcagccagaaagaagccatgcagcataaggatgagaaggag
accatgacagagccactgcactatgtggaggatgttcacaagctcacagatgctaaagaa
atctctcaggcttacatgggcctcaaggataccaacagatctcctctccctgatatgcgt
aagatgaatgaggatggagagctgtggctggtgtatgagggcttgaaggagaccaacagg
ttgttggaatcccagctgcaggctcagcggcgctctcatgaggctgagctggagtctctg
agaggagaactgcactgtgtgaaggaggaaaaccagagacagcagcagctcctcacacag
aacctccagcttcctcctgaagctcgaatcgaggccagtttacagcacgagatcacacgc
ctcactaacgagaacctggactttccagttgagaacccaaaggtctacaaaatcaacata
ctgcgcaggataattgaccttatggaacaactggagaaacaggacaagacggttcgcaag
ttaaagaagcagctgaaagtattcgccaagaagatcaatgacctggaaggtggccaggtg
gagaacgtttctccgggtcagatggctgatgagccgatccgtccagtcaacattccacgg
cgagagaaagacttccagggaatgctggagtacaagaaggaggacgaactcaaactggtc
aagaacctcattctggaattgaagccccgtggtgtggcagtgaacctgattcccggtttg
ccagcctacatcctcttcatgtgtttacgacacgccgactacatcaatgacgaccagaaa
gtccgtgcgctgctcacctccatcatcaacagcatcaagaagatcctcaaaaagagaggt
gatgactttgagaccgtatcgttctggttggcgaacacgtgccgcttcctgcactgtctg
aaacaatacagtggagacgagcaatttatgaagtttaactcgtcgaagcagaatgaacac
tgtctgtccaactttgacttggcggagtatcggcaggttctgagtgatttggccattcag
atttaccaacaactcatcaagtgtatggagaatatcctgcagcccatgatcgtctccggg
atgctggagcacgagaccatccagggtgtgtctggcgtgaagcccaccggtctgcgtaag
aggacatccagcgtagcagatgagggaacgttcacactcgactccatcatccgccagctc
aactccttccacagcatcatgtgtcaccatggtaacgaccccgagctcattaagcaggtg
gtcaagcagcagttctacatcattggtgccgtcacactaaacaacctgctgctgcgcaaa
gacatgtgctcctggagcaagggcatgcagatcaggtacaatgtgagtcagttggaggag
tggttgagggagaagaacctgatggtgtgtggtgcgaaggagactctggagcctctgatt
caggcagcacagctactgcaggtcaaaaagaagaccgatgaagatgctgaggccatctgc
tccatgtgtaactcaatgagtactgctcagattgtgaaggtgttgaacctgtacactcct
gtcaacgcctttgaagagcgagtgtctgtaacattcatacgaaccatacagaatcgcctg
agggatcgcaaagagtcccctcaactcctgctcgacacgaaggtaatctaccccgtgacc
ttcccattcaacccatcctccctcgccctggacaccattcagatccctaccagcctcaac
ctgtgcttcctcaatcgcgtctaa
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integrated database retrieval system
