Silurus meridionalis (southern catfish): 124395649
Help
Entry
124395649 CDS
T08004
Symbol
usp8
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 8
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04137
Mitophagy - animal
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124395649 (usp8)
04137 Mitophagy - animal
124395649 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124395649 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124395649 (usp8)
04121 Ubiquitin system [BR:
smeo04121
]
124395649 (usp8)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124395649 (usp8)
Peptidases and inhibitors [BR:
smeo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124395649 (usp8)
Membrane trafficking [BR:
smeo04131
]
Endosome - Lysosome transport
Others
Others
124395649 (usp8)
Ubiquitin system [BR:
smeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124395649 (usp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Metallothio_Pro
CCD97-like_C
CDC45
Motif
Other DBs
NCBI-GeneID:
124395649
NCBI-ProteinID:
XP_046720299
LinkDB
All DBs
Position
13:1036855..1052847
Genome browser
AA seq
1047 aa
AA seq
DB search
MPVVATGAKELYLSTSLGDLNKKAEIKLDKASTRHYVQSACKLFKAAEECRLDRDEEKAY
VLYMKYLTVYDLIKKRPDFRQQQDFFMSMLGPLSFKKAIEEAEKLSASLKHRYEEDEVRK
KLEERDRREEKERREQKVEKDKALENRKDSKKAKEQSETKSVNSSAPLSGGINAQQLYRM
MKDPNLSVLVMDTRKQADFVESHMAVPNQNYISVPEEAISPGITVNQIELKLPSESLSQW
KQRGFADYIILLDWFSSVSDLRLGTTLQSLKDALYKWDSVTILRTEPQVLEGGYENWLLY
YPMFTSNAKVRPPRQQTHNLIPELNFSYPCLEEPPPEPAPVCVMDDVEDLHANGIADVDT
NGKAAGPDTHTPTHTPSPSTQPTPTPTPTPTPTPPPSVSSVPSPKPPTVKTIPQFDRSTK
PMVKPSESGKPSPEGGAKEAKPKEGGAKDAPVSTVTNGPVIPDRSAKPTLEDKKMREIEE
EEKRQKEEEEKKKEEENEEREKKRKLERQKAEEVEEKEEGDEKGKRGGVKDQALDAQLKS
MSLDSPLPHTAVSDIKREPLTRARSEEIGRAVPGLPEGWMKFLDTVTGTYRYYHSPTNRV
HLYPPEVTPPATPPATPSKPKPRPGTSEKEKEKEKEREREREREQSKLKRSYSSPDITQD
LNAEGARKPXTNPTVNRETKPVTATSYTKAEIARPSAAKIRTMNPIFGGLGPCLTGLRNL
GNTCYMNSILQCLCNTPCMAEYFNRNHYQEDINRLNFLGHKGEVAEEFGAIMKALWSGQF
KYISPRDFKITIGKINDQFSGYEQQDSQELLLFLMDGLHEDLNKADNRKRWKEEACDAVD
DVSVAEWAWQKHKLLNESIIVTLFQGQFKSTLQCLTCHHRSRTFETFMYLSLPLASSYKC
SLQDCLKLFSKEEKLTDNNKVYCPHCKAQREFTKKLEIWKLPPILLVHLKRFWYEGRWKQ
KLQTSVDFPLENLDLSQYVIGPKSSVKRYNLYAMSNHYGGLDGGHYTAYCRNAARQNWYK
FDDHEVSEISSSSVKSSAAYIFFYSSL
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtggtggctacaggagcgaaggagctgtacctctccacctcactgggagatctg
aacaaaaaagctgagattaaactggacaaagccagcaccagacactatgttcagagtgcg
tgtaagctctttaaggcagcagaagagtgccgcctggaccgagacgaggagaaagcctac
gtcctctatatgaagtacctgacggtgtatgacctcattaagaagcggccagacttcaga
cagcagcaggacttcttcatgtccatgctcggaccactgagctttaagaaggccatcgag
gaggcggagaaactttctgcaagtctgaaacacaggtacgaagaggatgaagtgcggaag
aagctggaggagagagacaggagagaggagaaggagagacgagaacagaaagtggaaaag
gacaaagccctggagaacagaaaggacagcaaaaaggctaaagaacagagcgagaccaag
agtgtgaactcatcagcgcccctgagtggaggtatcaacgctcagcagctgtacaggatg
atgaaggacccaaacctgagtgtgttggtgatggacactcgcaaacaagccgactttgtg
gagtcacacatggccgtgccgaatcagaattacatcagtgttcctgaggaggccatcagt
cccgggatcacagtaaatcagatcgagctgaagctgccgtcagagtctctgtctcagtgg
aagcagcgtggctttgctgattacatcatcctgctcgactggttcagctccgtctctgac
ctgagactcggcaccaccttacagagcctgaaggatgcgctgtataagtgggacagtgtg
acgatcctgcgcactgagcctcaggttctagagggaggttatgagaactggctgctttat
tatccgatgttcaccagcaacgccaaagtcagacccccacgccaacaaacacacaacctg
ataccagagttgaatttcagttacccgtgtctggaggagcctccacctgaacctgcacct
gtgtgtgtgatggatgatgtggaagacctacacgctaacggcatcgcagacgtggataca
aacggcaaggctgctggtcctgacacacacactcccacacacactccgtcaccaagcaca
cagcctactcccactcccacacccacacccacacccacaccacccccgagtgtgtccagt
gttccgagtccaaaaccacctacagtgaaaacaataccacagttcgaccgttcgaccaaa
ccgatggtgaaaccctccgaaagtggaaagccgagccctgagggtggagccaaagaagcc
aagcccaaagagggcggggctaaagatgcacccgtttccacggtgaccaacggcccagtg
atccctgatcgctctgcaaagccgaccctggaggataagaagatgagagagatcgaggag
gaagagaaacggcagaaagaggaggaggagaagaagaaagaagaggagaatgaagaaaga
gagaagaaaaggaaactggagcgtcagaaggcggaggaagtggaggagaaggaggaagga
gatgagaagggaaagagaggaggagtgaaggatcaggcgctggacgctcagctcaagagc
atgtctctggattcccctctgccccatactgctgtctctgatataaagcgggagcctctg
acccgtgctcggagtgaggaaataggcagagcagtacctggtctaccagaaggttggatg
aagttcctggacacggtcactgggacgtatcgctattatcactcccccaccaatcgggtg
cacctttacccccctgaggtcacgccccctgccacacccccagccacaccctccaaaccc
aaaccccgccctggaacatcagagaaggagaaggagaaagagaaggagcgagagagagag
cgagagagagagcagtccaaactgaagcgctcatactcgtcccctgatatcacccaggac
ctgaacgctgagggagccagaaaacccnncacaaaccccactgtgaacagagaaaccaaa
cctgtgactgccacttcctacactaaagccgagatcgctcgcccgtctgccgctaagatc
cgcaccatgaacccgatattcggcggcttgggtccgtgcctaacaggtctgcgcaatctg
gggaacacctgctacatgaactccatcctgcagtgtttgtgtaacacaccgtgcatggcc
gagtatttcaacaggaaccactaccaggaggacatcaacaggttgaatttcctgggtcat
aagggcgaggtggctgaggagttcggtgccatcatgaaggctctgtggtcagggcagttc
aaatacatcagccctcgagactttaagatcaccatcggtaaaattaatgaccagttctct
ggctatgagcagcaggactctcaggagcttctgctgttcctcatggacggcttacacgag
gacctcaacaaggcggataaccgtaagcggtggaaggaggaggcgtgtgatgcggtggat
gatgtaagcgtggcggagtgggcgtggcagaaacacaagctgctgaacgagtcgatcatc
gtgacgctgttccagggtcagttcaagtccacactgcagtgtctgacctgccaccatcgc
tctcgcaccttcgagaccttcatgtacctctcactgccactcgcatcgtcctacaagtgc
tctctgcaggactgtttgaagctcttctctaaggaggagaagttgacggataataataag
gtgtactgccctcactgtaaagctcagagagaattcaccaagaagctggagatctggaag
cttccacccatcctgctcgtccacttaaagcggttctggtatgagggccggtggaagcag
aagctacagacgtctgtggatttcccgctggagaatttggacctgtctcagtacgtgatt
gggccgaagagcagcgtgaagagatacaacctgtacgccatgtctaaccattacgggggt
ctggatggaggtcactacacggcgtattgcagaaacgccgctcgccagaactggtataaa
ttcgacgatcacgaggtttcggaaatctccagctcctccgtcaagtcgtctgctgcctac
atcttcttctactcctctctgtga
DBGET
integrated database retrieval system
