Silurus meridionalis (southern catfish): 124395657
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Entry
124395657 CDS
T08004
Symbol
zfpm1
Name
(RefSeq) zinc finger protein ZFPM1
KO
K17441
zinc finger protein ZFPM1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124395657 (zfpm1)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
124395657 (zfpm1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FOG1-like_PR
zf-C2H2
zf-C2H2_jaz
zf-C2H2_4
zf-met
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
124395657
NCBI-ProteinID:
XP_046720318
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Position
13:complement(11987187..12051725)
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AA seq
1201 aa
AA seq
DB search
MSRRKQSKPRQIKRSIGDLDGGEENPPDDVSLSGEEAGASDQDDSAECDESSPSFVPLYN
EEPRTHESSDTPDVDEEDEKGWKASDEEEQQMEEEKEEEDEEKEEEVEPNWNGPDDLKLS
DGPEDSKVLACKDLLVDTLWGPFSGSIQSDENTNGVSTQSLVCDGEDCWLTRIPLTSSSS
EANCIIYSQDDGLYCKLTQELSSGDALVAIILWPSGGQHAVTQTNNPAVKEEPVYPATLP
SDIQLLPQQAGMAAILATAVVNKDIFPCKDCGIWYRSERNLQAHLMYYCASRQKQTATAS
PPQDKPKDSYPNERVCPFPQCNKSCPSASSLEIHMRTHSGERPFVCLICLSAFTTKANCE
RHLKVHTDTLNGLCHGCGFISTTRDILYSHLVTSHMVCQPGSRSEGYSPKLPVASGLSPG
DSGILLKCQVCGFSADTPALLQQHVHTHLEIRVPVERSHTPRQGSPVTSDLSEPQDQELS
ASMPRPDSSSPGANGGAATSRGCSSPEQLKIKEEPQSDSENESRGEEQDGNHSANATEPS
SPHQSSPTSPTVIAVKAEPSSPSPGSSPVHLGAGASVLPGGALFLPPYLFSPEAAIMPQA
SEILAKMSEMVHSRLKSGQVPASAQGFYSSGSPGGVLKGATCFECDITFNNINNYYAHKR
LYCSGRHQQGEGSGLVTDDPVTAAALSGHDASPQTGPANSTSASPSHTDSAVAITDTKPA
EVKSETPGLKDTACSSSSEGEGAGGGRVSEGSQSPAERSGSAEDLDEDTTRTFCQACNIH
FSRHENYIVHKRFYCASRHDPSNQRLLAGKAAFVPQPIRTRKRKKMYEIHMARNEALASA
AALPAVPGMPVKQEGASGHSGTPVATAPSSTCSSSPESDGPIDLSKKPCLRENSRGNNIP
ALPLTDYHKCTACSISFNSIENYLAHKTYYCPATALQPQTREQLHRLKRPASTSPKNRVP
DLHPDTKSHQTGKPTVVPHTSVLPSLESTSHSMPGVKTPSTPPVICPYCPSNRPVTSDLV
EHFRTAHGLVLATQQQSEVQPPNVSPSNSLNTRNGAPLTPPKPGPRPQRDGVNGQNKRDA
ASPSSPLLNGSPIAQHPIGTGSPKAAPPALSPTGSVSLTVSPVSDTLREIGSQGHTTTHL
VLPEKAVSHISPTTPKAVLATSLQNGNTRYCRLCNIKFSSLSNFIAHKKYYCSSHSAEHV
K
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtaggaagcagagtaaacctcgtcagatcaaacgctctattggggatcttgat
ggtggagaagagaatccacctgatgatgtcagtctctcaggggaagaggcaggtgcctcg
gaccaggatgactctgcggagtgcgacgagtccagtccctcctttgtgcctctttacaat
gaagagcccagaactcacgagtcttcagacacaccagacgttgatgaggaagatgaaaaa
ggctggaaagccagtgatgaggaagagcagcagatggaagaggagaaggaggaggaggat
gaagagaaggaggaggaagtggagccaaactggaatggcccagatgatttgaagctctca
gatggaccagaggactctaaagttctggcctgcaaggacctgttggtggacacactctgg
ggacctttctctggaagcatccaatcagatgaaaatacaaatggagtatccactcagagt
ctggtgtgtgatggtgaggactgttggctcacaagaatccctttgacctcctcttcctca
gaagcaaactgcatcatttacagtcaagatgatggtctgtactgtaagctcacgcaggag
ctctctagtggagatgctttggtggccatcattttgtggcccagcggagggcagcacgct
gtgactcaaactaataaccccgcagtgaaagaggagccggtatacccagcaaccctgcct
tctgatatccagctcctccctcagcaggctggcatggctgccattttggcaactgcagtt
gttaacaaggatatctttccatgcaaagactgcgggatctggtacagaagtgagaggaac
ctgcaagctcatctcatgtactactgtgccagccgacagaaacaaacggccacagcttcc
cctccacaggacaagcccaaagactcctaccctaatgagagggtgtgccctttcccccag
tgcaacaagagttgccctagtgctagctcactggagatccacatgaggacacacagtggg
gagcgtccatttgtctgtttgatctgcttgtcggcattcactaccaaggctaactgtgag
cggcatttgaaggtgcacactgacactctgaatggcctgtgccacggctgtggattcatc
tctacaactcgagacattctctacagccatctggtcactagccacatggtctgtcagcct
ggttctcgcagtgaaggctactccccaaaacttccagtggcttcaggcctgagtccgggg
gactctggcatattgctgaagtgtcaagtgtgtggattttcagcagacacccctgctctg
ctccaacagcatgtccatacccacctggagatcagggttcctgttgaaaggagccacaca
cctcgccaaggtagccctgtaacctcagatctctcagagcctcaggaccaagagttatca
gccagcatgcctagaccagactcttctagccctggggccaatggtggagcagccacctcc
cgtggctgtagttctccagagcagctgaagatcaaggaggagccacagtctgactcagag
aatgaatcaaggggtgaagagcaggatggcaatcatagtgcaaatgctacagagccaagc
tctccacatcagtcctctcctacgagtcctacagtcattgcagtaaaagcagagccatcc
agtccttctccaggctctagccctgttcacttgggagcaggggcatcagtgttacctggt
ggagctttgtttcttcccccatatctttttagccctgaggctgccattatgccccaggca
tctgaaatcctggccaaaatgtcagagatggttcatagcaggctgaagagtgggcaggtc
ccagcatctgcacaaggcttctactcttcaggctctcctggtggcgtgctcaagggagca
acatgctttgaatgtgacattaccttcaataacatcaacaactattatgcccacaaaaga
ttgtactgctcaggcagacaccagcaaggggaagggtcaggcctggtaacagatgatcca
gtaactgcagcagccctttcaggtcatgatgcctcaccacaaacaggaccagccaattca
acatcagcttctcctagtcacactgactctgcggtggcaattaccgataccaaaccagcc
gaggtaaagagtgagactccaggactgaaagacactgcatgttcatcttcttcagagggt
gagggtgctggagggggtagggtaagtgaggggagccagagccctgcagaaaggagtgga
tctgctgaagacctggatgaggataccactcgaacattctgccaggcctgcaatattcat
ttcagcagacatgagaactacattgtccataagagattttattgtgcctcacgtcatgac
ccttccaaccagcgcctcttggcaggcaaagctgcctttgtgccacaacccattcgcaca
cggaaacgcaaaaagatgtatgaaattcatatggcacggaatgaagccctggccagtgca
gctgcccttcctgctgtaccaggcatgccagtgaaacaagaaggtgccagtggtcattct
gggacacctgtggccacagctccaagctctacttgcagctctagtccagaaagtgatggc
ccaattgaccttagcaaaaagccttgcttgcgagagaactcaagaggaaataatattcca
gcattgccactcacagattaccacaagtgtacagcctgcagtatcagctttaacagtatt
gagaattacttggcccacaaaacgtactattgccctgccaccgccttgcagcctcaaacc
cgggagcagttgcatcggcttaagagacccgcttctacttcccctaagaatcgagttcct
gatctgcatcctgacaccaaaagccaccaaactggaaagcctacagtggtccctcacacc
tctgtcttacccagtctggagtctacctctcattctatgcctggggtgaagaccccaagc
actcctcctgtgatttgtccttactgcccttctaatcggccagtgacctctgatctggtg
gagcattttaggacagctcatgggctagtccttgccacacagcagcagtcagaggtccaa
ccacccaatgttagtcccagcaacagcctcaatactcgcaatggagctccactaacccct
cctaaacctggccccaggccccagagggatggtgtaaatggccagaacaagagggatgct
gcctcgccctcctcccccctgcttaatggaagccctatagcacaacatcctattgggact
ggctctcctaaagcagccccccctgctctctcccccacaggctcagtttccctgactgtg
tcgcctgtgtctgacactttgagagagatagggtcacaaggacataccaccactcacttg
gttctcccagagaaagctgtgagccacatatccccgaccactccaaaggcagtccttgca
acatctttacaaaatgggaatactcgctactgtcggctgtgtaacatcaaatttagcagc
ctgtccaacttcattgcacacaaaaagtactactgctcctcccacagtgctgaacatgtc
aaatga
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