Silurus meridionalis (southern catfish): 124395670
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Entry
124395670 CDS
T08004
Symbol
phaf1
Name
(RefSeq) UPF0183 protein C16orf70 homolog isoform X1
KO
K27411
phagosome assembly factor 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124395670 (phaf1)
Membrane trafficking [BR:
smeo04131
]
Autophagy
Other autophagy associated proteins
Others
124395670 (phaf1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAF1
Motif
Other DBs
NCBI-GeneID:
124395670
NCBI-ProteinID:
XP_046720339
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Position
13:12096463..12109560
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AA seq
425 aa
AA seq
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MLDLEVVPERSLGNEQWEFALGMPLAQAISILQKHCRIMKNVQVLYSEQMPLSHDLILNL
TQDGIKLLFDACNQRLKVIEVYDLSKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVY
NAAEQLFHLNFRGLSFSFQLDSWSEAPKYEPNFAHGLASLQIPHGATVKRMYIYTGNNLQ
ETKAPGMPLACFLGNVYAECVDVLRDGTGPLGLKLRLLTAGCGPGVMADGKVRALERNIY
FGYSCQDVLSALGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDST
THLVKKFVLHTNYPGHYNFNIYHRCDFKIPLIIKKDGPDPQEEDCTLTTYSKWDQIQELL
GHPMEKPVVLHRSSSANNTNPFGSTFCYGLQRMIFEVMQNNHIASVTLYGAPRPASLPRA
ESSAH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgctggatctggaggtggttcctgagcgctctttgggaaacgaacaatgggaattcgca
ttaggaatgccattggcccaggccatttccatcttgcagaaacactgccgtattatgaag
aatgtccaggtgctctacagcgaacaaatgccactcagtcatgacctcatactcaacttg
actcaggatggaattaaactgctgtttgatgcctgcaatcagagactgaaggttattgaa
gtgtacgacttgagcaaggtgaaactgaaatactgtggagtacattttaactctcaggca
atagcacctaccatagaacagattgaccagtcctttggcgctactcacccaggagtgtac
aatgctgcagaacagcttttccatctgaacttcagaggtctctcattctccttccagtta
gactcgtggagcgaagccccgaaatacgagcctaactttgcccatggcttggcctccctg
cagattcctcatggggctacagtgaagaggatgtatatttacactggaaacaacctacaa
gaaaccaaggctccggggatgcccctggcctgttttcttggaaatgtgtatgccgagtgt
gtggatgttctgagggatggaacagggcctctgggtctgaaactgcgcctcctcactgca
ggctgcggcccaggagtgatggctgatggcaaagtgcgggcacttgaaaggaacatctac
tttggttattcttgccaggatgtcctgagtgctctaggctctccacataaggttttctac
aaatctgaagacaagatgaagatccattctccgtctccacacaagcaagttccgtccaag
tgtaatgactacttctttaactacttcaccctaggagtggacattttgtttgattccaca
acccacctggtaaagaagtttgtgcttcacaccaattatcccggccattacaatttcaac
atataccatcgatgtgattttaagattccactcatcattaaaaaagatggacctgatcct
caggaagaagactgtaccctcaccacctacagcaagtgggatcagatccaggagttattg
ggacaccccatggagaaaccagtggtgcttcataggtcatcatccgctaataacactaac
ccctttggatcaacgttctgctacgggctgcagaggatgatcttcgaggtgatgcagaat
aaccacatagcatcagtgaccctgtacggagcccctcgtcctgccagccttccacgtgcc
gagtcaagtgctcactga
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