Silurus meridionalis (southern catfish): 124395698
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Entry
124395698 CDS
T08004
Symbol
dmxl2
Name
(RefSeq) LOW QUALITY PROTEIN: dmX-like protein 2
KO
K24155
rabconnectin-3a
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
124395698 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124395698 (dmxl2)
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124395698 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
124395698 (dmxl2)
RAVE complex
124395698 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_IFT140_1st
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_LRRK2
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
124395698
NCBI-ProteinID:
XP_046720392
LinkDB
All DBs
Position
13:1324509..1361655
Genome browser
AA seq
3026 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNAIPFTAYGSGCDIVILASDFECVQIIPGAQNGNIQV
GCVECSHQLGRIAASYGNTVCIFEPISSNLNKRHQQLNYQWQKTGQFLLNAMTYNLAWDP
QGNRILATTEWLQLWAPPTADTLQEEDEDEKSHPVLNDWKCVWQCKTASAVCIIKWSPDG
EYFATVGKDDCLLKVWYSTLGWRSVMVDVCERKSGSLNFSFIYLAHPRTVTGFSWRKTSK
YMAKGSVCNVLLTSCVDGICRLWSETLLPEDSLLGGQITENSSSTSSLQHSGQKDKIQHA
LESIHHLKQLRRGRRRSSALVTHTELLPSQLNSHDTHRHITHHGNALCHFHISASINPNT
DIPAALAGAGLFSSGDINGGFVVHWLNNKDLSFTSSMDVFMQHLRRFSEQNLEHTSEDFK
QDGIAKFDFDLDEMSDKASEHDEGEQEGSTKASSPGSSSSLPPPSVLLERKMESLTLEWN
RSPDMIFTIHPVDGSFLVWHIKYLDEYIPGIFRQVQVAFSSQIPVAFPTGDANSLNKNIM
MYACSAPERDAEVTVEQDRKCAPLSTVIGPAVMMVSKHVDGSLNQWAVMFAEKSAFSNVL
TVSHKFRYCGHRFHLNDLACHTVLPLLLTSSHHNAVLTPPPGHDESHTAPSRPPRPSRGL
APKEMSSNVATRTFHDPNAIYSELILWRVDHIGPLSCTGGVSEIARINSLHTAAFSNVAW
LPTLIPSSVLGTYCNSASACFVASDGKNLRLYQAVVDARKLLDELSDPETSKLVGEVFNI
VSQQSTARPGCIIELDAITNQCGSNTQLLHVFQEDFILGYKPRDDVSDVNTSEFPSADEI
HPPPFSEKFFLVVIEKDENRNSVLQMWHLHLKSVHACVEDTPQEQPYQNQLTVPHMLPNA
DSSPESTPSQSPLPRSSSSANLQSASKLILSSTLVYSHRLELPLGVEVIRATPSAGHLSS
SSIYPVCLAPYLIVTACSDGRVRFWRCSVDSEGSAPYRWEPWCLLNEEEDNNSALSVLGR
PVAVSCSYTGRLAVAFKQMISTELSPSSKDFSMHVSIFECESTGGSEWVLEQTIHLDDFG
KADSTLDPRISVDSNLVVYSKSDLFVRKQNPNIKHFVHLDWLSKEDGSHILTVGVGSSIL
MYGRISGIVAEQTGGKDGMAVVTLPLGGSVKQGVRSRWVLLRSVDLVSSVDGTPSLPVSL
SWVRDGILVIGMDCEMHVYAQWYQDKKPSDSEDNDDAFMVKKSAIEMPEDSIRVPAVIQD
GGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKCIAGEVAVVRDAVAGEG
GARRHLSRTISVTGSTAKDTIVAGRDGGRDYTEINSIPPLPLYALLSADLDTSYRNKLAD
DVKCPERETQTSSENQYAELFQEPTVNTDDFASFAWADKVEKKEKKTRVIDLSQYGPTCF
GPEHAQVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSAEVGGATNKQYRGGEALDECG
LRYLLAMRLHTCLLTSLPLLYRMQLLHQGVSTCHFAWAFHSEAEEEMLNMIPAMQRGDLQ
WSELRAVGVGWWIRNINTLRRMVEKVAKAAFQRNNDPLDAALFYLAMKKKAVLWGLFRSQ
HDEKMTQFFSHNFIEDRWRKAALKNAFSLLGKQRFEQAAAFFLLAGSLKDAIEVCLEKME
DIQLAMIVARLYEADFESSSTCQGILYEKVLGCRRDGSEFSCSKMHPDPFLRSIAFWIMK
DYTRALDTLLEQTPKEDDENPDVMVKSCNPVVFSFYNYLRTHPLIVRRHFASPDGSDRGS
SPDQINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVTKNTSSISIGASTPNTSDTQS
GTRTSDLDWSQTVIRGDEEELKLDWGDDEDEDEDEEDKKGLVMKEDKKEKPEEPEEEKQA
GEWKVDVIAEQLKFRACLKILMTELRTLATGYEVDGGKLRFQLYNWLEKEIEAMHRICNY
KVEDQRSVGELEKWNGSVTVDGDGDEHERTGETDVYERHLQDRRRLQAKQLHAERRKAWL
RKNEALLRVFLTYCSLHGAKGGGVTSVRMELLFLLQESQQETTVKQLQSPLPLATTLPLL
SASIAPTKTVIANPVMHLNNHIHDILYTVVQTEAPPHPDTPDNRVNALHTLAASLSACIY
QALCDSHSYSSQSEANQFTGMVYQGLLLSERRRLRTESIEEQATPTSTPAHWPGVSSLIS
LLTCSRGEEQPRLNVMLCEGVVAVYLSLLLHGLGTHSTNELFRLAAHPLNSRMWAAVFGG
GAKIIVKPKRPAEVTPAAFEAESSEESPDTPSLPVTPTSHNNQPGNHGDGTVQPESSDNS
WDSEQQVENKPLTALPDQLNPDSGEVAPPPTPPAEEVDRQRRRFNMRMLVPGRPVKEIQA
TPPPIPTERPAYKEKFIPPELSMWDYFVAKPFLPLSDSGALYDSDESGDEDEDDDEDAFL
SDTQMTEHSDPNSYSWCLIRLVMVKLALHNIKNFLPIAGLDFTELPVSSPLCNSVLKCME
KWEQQLQDRMDRFDGPPPNYINTFPADASVGGGPAALRHKAMLEPDNTPFKAKHRLSFPA
RRLWHFLVKQEVLQETLIRYIFTKKRKQSECLENHLDRHTHNCVAGAHKLNKVEADLGYP
GGKAKIIHKESDIIMAFAINKAKPSEIVLASTHDVQEVDVSTLLAAQPYTWIGEDFDKES
RSSDDDHRSSHTNIAQASSAPFAPPPMPVSASMPWLGSGQTSMGASVIVKRNLNNVKRMT
SHPIYQYYMTGAQDGSVRMFEWNRPQQLICFRQAGNARVTRLYFNSQGNKCGVADGEGFX
SLWQVNQTSSNPKPYLSWQCHSKVCGDFSFITSSSLIATAGHSTDSRNVCLWDTLISPSN
SMVHAFPCHENGATVLQYAPKHQLIISGGRKGFVCIFDLRQRQLLHTFQAHDSAIKALAL
DSSEDFFITGSAEGNMKVWKLASHGLMHSFSTEHAKQSIFRNIGAGVMQIETCSGNRIFT
CGADGTLKMRVLPDRYNTPSSIFHIL
NT seq
9081 nt
NT seq
+upstream
nt +downstream
nt
atgcatctccaccaggtgctgaccggagcggtgaatccgggggactgctgctactcggtt
gggagcgttaacgccatcccgttcacggcatatggttcagggtgtgatatcgtgatcttg
gccagtgatttcgagtgtgtgcagatcattcctggagctcagaatgggaacatccaagtg
gggtgtgtggagtgttcacaccaacttggacggatcgctgcctcgtacggaaacacagtg
tgcatttttgaaccgatttcctccaacctgaataagagacaccagcaactgaattatcaa
tggcagaagactggacaatttctactgaatgccatgacctacaacctggcctgggaccca
caaggtaaccgtatcctggcgacaacagagtggctacagctctgggctccgcccaccgca
gacacgctgcaggaggaagacgaagacgagaaatcacaccccgtcctcaatgactggaag
tgtgtgtggcagtgcaagactgcttctgctgtgtgtataattaaatggtctcctgatggg
gaatacttcgccactgtgggaaaggatgattgtttgttgaaggtgtggtactccacgctg
ggatggaggtctgtaatggtggatgtgtgtgagaggaaatccggctcgctcaatttctcc
ttcatctatctcgctcatccccgaactgtcacaggcttctcctggaggaagaccagcaaa
tacatggccaagggctcggtgtgtaacgtgctgctgacgtcgtgtgtggatggaatctgt
cgcctgtggagcgagaccctgctgcccgaggacagtctcctaggaggacaaatcacagag
aacagcagctccacatcatcactgcagcacagtgggcagaaagacaaaatacaacacgcc
ctggagtccattcaccacctgaagcagctcagacgaggtcggagaagatcctcagctctg
gtcacacacactgagctgctgcccagccagctgaactcacacgacacacaccggcacatc
acacaccacggcaatgcactgtgccacttccacatctcggccagcattaaccctaataca
gatatcccggcggctctggcaggggcaggtctcttctcttcaggagacattaacggaggg
tttgtggtccactggctgaacaataaggacctgagtttcacctcgtccatggatgtgttc
atgcagcacctgagaaggttctctgagcagaacctcgagcacacctccgaggacttcaag
caggacggaattgccaagtttgattttgacctggatgagatgtcggacaaggcatcggag
catgatgaaggagagcaggagggcagtacgaaggcgtcttcgcccggctccagcagcagt
ctccctcctccctccgtcctcctggaacgtaagatggagtccctcactctggagtggaac
cgaagccctgacatgatcttcaccatccatccggtcgatggatccttcctggtctggcac
atcaagtacctggacgagtatatccccggaatcttccgccaggtccaggtggcgttctcc
tctcagatccccgtggcgttccccaccggcgatgccaactctctgaataagaacatcatg
atgtacgcctgctccgccccagagcgagacgccgaggtcaccgtggagcaggacaggaag
tgcgctcctctgagcaccgtgatcggccccgctgtcatgatggtgtcgaagcacgtcgac
ggctccctcaaccaatgggccgtgatgtttgccgaaaaatccgccttctccaatgtgctg
acggtttcgcacaagttccgttactgcggccaccgcttccatctcaacgacctggcgtgc
cacactgtcctgcccctcctgctgacctcgtcacaccacaatgccgtcctgactccaccc
cccggacacgacgagtctcataccgccccgtcccgccctcctcgtccgtctcgaggcctc
gccccgaaggagatgagcagcaacgtggcgactcggaccttccacgaccccaatgccatc
tacagcgagctgatcctgtggcgcgtcgaccacatcgggccgctgtcctgcaccgggggc
gtgtccgaaatcgcacgcatcaactccctgcacaccgctgccttctccaacgtcgcctgg
ctgcccacgctcatccccagctctgtcctcggaacctactgtaactccgcaagcgcgtgt
ttcgtggcttcggacgggaagaacctgcgtctctatcaagctgtggtggacgccaggaaa
cttctggacgagctgtcggaccctgagacctcgaaattagtgggtgaggtcttcaacatt
gtgagtcagcagtccactgctcgaccaggctgcatcatcgaactggatgcaatcactaac
cagtgtggctcgaacacacagctgcttcacgtctttcaagaggatttcatcttaggatac
aaacctcgcgacgatgtcagcgacgtaaacacctccgaattcccttcagctgatgagatc
catccgcctccgttctctgagaagttctttttggtcgtgattgagaaagacgagaacaga
aactctgtgctgcagatgtggcatcttcatctgaagtctgtgcacgcgtgtgtggaagac
acgccacaggagcagccgtaccagaaccagctgacagtaccacacatgctccccaacgcc
gactcgtctcctgagtcgaccccaagtcagagccctcttcctcgctcatcttcctcggca
aacctgcagtccgccagcaaactgatcctcagctccacccttgtctacagtcacagactg
gagctccctctgggggtggaggtgatccgcgcaacaccatctgcaggtcacttgagctct
tcctccatttacccggtgtgtttggctccatatctgatcgtgaccgcatgctcagacgga
cgtgttcggttttggcggtgctccgtggattcagaaggttctgccccataccgctgggag
ccgtggtgcctcctgaacgaggaggaggacaacaatagcgccctgagtgttttgggacgc
ccagtcgccgtcagctgctcctacacaggccgtctcgctgtggccttcaaacagatgatt
tctactgagcttagcccgagctccaaagacttctccatgcacgtctccatctttgagtgt
gagtccaccggtgggtcagagtgggttcttgagcagactatccatctagatgattttggg
aaagctgacagtacattagaccccagaatcagcgtggacagcaacctggtggtttacagc
aagtctgatctgtttgttaggaaacaaaaccccaatattaaacactttgtgcacctggac
tggctctccaaagaagacggttcacacatcctcaccgtcggagtcggatccagcattctg
atgtatggccggatctccggcattgtcgccgagcaaaccggcgggaaagatggcatggcg
gttgtcactctgcctcttggtgggagcgttaaacagggcgtccgctctcgatgggttctc
cttcgctctgtcgatctggtttcctccgtggacgggacgccgtctcttcccgtctctctt
tcctgggttcgagatggaatcctggtcatcgggatggactgtgagatgcatgtctacgct
cagtggtaccaggataagaagcccagcgactctgaagacaacgatgatgctttcatggtg
aagaagagcgcgatcgaaatgccagaggattcgattcgagttcctgccgtaatccaagat
ggaggtctttttgaagcagcgcattcgctgtccccaaccttacctcagtaccatcccacc
cagctcttggagctgatggacttggggaaggtgagacgtgcaaaggccatcttgtcccac
ctagtcaagtgcatcgccggcgaggtcgccgtggtgagagacgctgtggcgggagagggt
ggagccagacgacatctgtctcgcaccatcagcgtgacgggaagcactgccaaggatacg
attgttgctggaagagatggtgggcgagattacacggaaatcaactccatccctcctctc
ccactgtacgccttgctctcggctgacctcgacacgtcttacagaaacaagttagccgat
gacgtcaaatgtcccgagcgggagacacagacatcctccgagaatcagtatgccgagctc
tttcaggaacccacagtgaatactgacgactttgccagctttgcttgggcagacaaggtg
gagaagaaggagaagaagactcgtgtgatcgatttgtcgcagtatggtcctacctgtttc
ggacctgaacatgctcaggtgctctcttctcacctaatgcactccagcctgcctggactc
acccgcctcgagcagatgttcctggttgcacttgctgatactgtggcaaccaccagcgca
gaggtgggcggagccacaaataaacagtacagaggtggggaggcgctggatgagtgcggt
ctcaggtatctgctggcgatgcgtttacacacctgtctgcttacatcacttcctcttctg
taccgcatgcagctgctgcaccaaggcgtctccacgtgccactttgcctgggcttttcac
tccgaggctgaggaggagatgttgaacatgatccccgccatgcaaagaggagacctgcag
tggtcagagctccgggctgtcggtgtcggctggtggatccgaaacatcaacactctgaga
cgcatggtggagaaggtggccaaagcggcgtttcagagaaataacgatcccctcgatgct
gcactcttctacttggccatgaagaagaaagctgtgctctggggtctgttcaggtctcag
catgatgagaagatgactcagttcttcagccataacttcattgaggatcggtggaggaag
gcggcgctgaagaacgcgttctctctgctggggaagcagcgcttcgaacaagctgctgcc
ttcttcctgctcgccgggtcactgaaagatgccatcgaggtttgtttggaaaagatggag
gacattcagctggcgatgatcgtcgctcgcctgtacgaagccgacttcgagagctcgtcc
acctgtcagggaatcctgtacgagaaggtccttggctgcagacgggacggctccgagttc
tcgtgcagtaagatgcacccggacccgttcctcaggagcatcgctttctggatcatgaag
gattacacgcgtgcgctggatacgctgctggagcagacgccaaaggaggacgacgagaat
ccggatgtgatggtgaagtcctgcaacccggtggtgttcagtttctacaactacttacgc
actcaccctctgatcgtacgccggcacttcgcgtctccagacggctcggaccgcggcagc
agcccggatcagatcaacctgatcgagcgcaaactcttcttcaccaccgccaatgctcac
ttcaaagtgggctgccccgtcctagccctggaggtcctgtccaaaatccccaaagtcacc
aagaacacctcctcgatcagcataggagcctccacgcccaacaccagcgacacccagagc
ggcacccggacctccgacctcgactggagtcagacggtgatcaggggagacgaggaggag
ctgaagctggactggggagatgacgaggacgaggatgaagacgaggaggataagaagggc
ctggtgatgaaggaggacaaaaaagagaaacccgaggagcctgaggaggagaagcaggcc
ggagagtggaaggtggacgtgatcgccgagcagctgaagttccgagcgtgtctgaagatc
ctgatgacggagctgcgcacactcgcaaccggctacgaggtggacggagggaaactgcgc
ttccagctctacaactggctggagaaggagatcgaggccatgcatcgcatctgtaactac
aaggtggaagatcagaggtcagtgggagagctggagaagtggaacggcagtgtgactgtg
gacggggacggggacgagcatgagaggacgggtgagactgacgtgtatgagcgccacctg
caggaccggcgcagactgcaggccaaacagctgcatgcagagagacgcaaagcctggctg
aggaagaatgaggcgctgctcagggtcttcctcacctactgcagcctgcacggggccaaa
gggggtggagtcacctcggtccgcatggagctgctcttccttctgcaagagtcacagcag
gagacaacagtgaagcagctacagtcgccgttgccgttggcaaccacgctgccacttctc
tcggctagcatcgctccgactaaaacggtcatcgctaatcctgtcatgcacctaaacaac
cacatccacgacatcctgtacactgtagtacagactgaagctccgccccatccggataca
cctgataaccgagtaaatgcactacacactttggcagcttctctgtctgcctgcatctac
caagcactgtgtgacagccacagctacagcagtcagtctgaggcgaaccagttcacaggg
atggtgtaccaaggcctgctgctcagcgagaggcggagactccgcacagagagcatcgag
gaacaagccacgcccacctccactcctgcacactggccaggtgtgtcgtctctgatcagt
ttgttgacgtgctctcggggtgaggagcagccgaggttgaatgtgatgttgtgtgagggt
gtggtggccgtgtatctcagcctgctcctacacggcctcggcacacactccaccaacgag
ctgttccgcctcgccgcccaccccctcaactcccgcatgtgggccgccgtcttcgggggc
ggagccaagatcatcgtcaagcccaagcgcccggccgaggtcacgccagctgcattcgaa
gcagaaagctctgaggaatcacctgacaccccgtccctcccagtcacacccacatcccat
aataaccagcctggtaaccacggtgatggcaccgtgcagccagagagctctgataacagt
tgggactcagagcagcaggtggagaataaacccctcacagcccttcctgatcaactgaac
ccggacagcggtgaagtagccccgcccccaacccctcccgccgaggaagtggatcgccag
cggcgtcggtttaacatgcgcatgctggttcctggtcgccctgttaaagaaatacaggcc
acgccccctccgattcccaccgaacgtcccgcctacaaggagaagttcatccccccagag
ctcagcatgtgggattacttcgtggcaaaacccttcctgcctctgtcagacagtggagct
ctgtatgactcggatgagagcggtgatgaagatgaggatgatgatgaggatgctttcctg
tctgacactcagatgacagagcacagtgaccccaactcatacagttggtgtctgattcgc
ttggtgatggttaaactcgctctacacaacataaagaacttcctccccattgcaggactc
gactttacagagctgcccgtgtcgtctccgctctgtaactcagtactgaagtgtatggag
aaatgggagcagcagctgcaggacaggatggacagattcgatggtcctccaccaaactac
atcaacaccttccctgcagatgccagtgtgggtggaggccctgctgcactgcgccacaaa
gccatgctggagcctgacaacacacccttcaaagcaaaacaccgcctttccttccctgcc
cgccgtctttggcacttcctggtgaaacaggaagttctccaggagactctgattcgctac
atctttaccaagaagagaaagcagagtgagtgtttagagaaccacctggaccgtcacaca
cacaactgtgtagcaggagcacacaaactcaacaaggtggaagcagatcttggatatcca
ggaggcaaagctaaaatcatccacaaggaatctgacatcatcatggctttcgctatcaat
aaggctaaacccagtgagatcgtcctggcctcgacccatgacgtacaggaagtggacgtg
tccacgctgctggctgctcagccgtacacctggattggagaggatttcgacaaggagtca
cgcagctcggacgatgatcaccgctcctcccacaccaatattgcacaggcaagctccgcc
ccctttgctcctcccccgatgcccgtctccgcctctatgccctggcttgggagtgggcaa
actagcatgggtgctagcgtgattgtgaagaggaacttgaacaatgtgaagagaatgacc
tcacatcccatctaccagtattatatgacgggagctcaggatggcagtgtgaggatgttt
gagtggaatcgcccacagcagctcatttgcttccgacaggcaggaaacgcccgagtcaca
cgcctttacttcaactcccagggcaataagtgtggagtggcggatggtgagggttttnna
agtctatggcaagtgaaccaaacttcatcaaaccccaaaccatatttgagttggcagtgt
cacagtaaggtgtgtggtgatttctctttcatcacatcctccagcctcatcgctacagca
ggacactctactgacagcaggaatgtgtgtctgtgggacactctgatctctcccagcaac
agcatggtgcatgcgttcccctgtcatgagaatggagctacggttctgcagtacgccccc
aagcatcagctgatcatctctgggggcaggaagggcttcgtgtgcatctttgacctccgt
cagcggcagctgttacacacgttccaggctcacgattcggccatcaaagctctggccctg
gactccagcgaggacttcttcatcaccggctcggccgagggaaacatgaaggtttggaag
ttagcaagtcacgggctcatgcactcgttcagcaccgagcacgccaagcagtccatcttc
cggaacatcggcgccggcgtgatgcagatcgagacgtgttccgggaaccgtatcttcacc
tgcggcgcagacggaacgctgaagatgagggttctgcctgatcgctacaacaccccgagc
agcatcttccacatcctgtag
DBGET
integrated database retrieval system
