Silurus meridionalis (southern catfish): 124395717
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Entry
124395717 CDS
T08004
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124395717 (chd2)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124395717 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
CHDCT2
Motif
Other DBs
NCBI-GeneID:
124395717
NCBI-ProteinID:
XP_046720438
LinkDB
All DBs
Position
13:complement(16013376..16093225)
Genome browser
AA seq
1780 aa
AA seq
DB search
MLKNKEKKEGEDASTHSNASSNSASEESNRSGSESGSQSESEQGSDRAHSQHSESNSTSE
SESCSESGSESAGSKSHQTIAEIKEKRVKRRDLADVKKMWEEHPDVYGVRRSNRSRQEPA
RLNIGAEDSSESESESHKRKVLRQKKKENTWKDDSNDEDEEEEDSSSESEQEEKKVRSRR
LPARRPRAKSSTAKQHQTHKGRKQRKQETSEEEEEDDEDEEEDTPIRLTRRRAATKVSYK
EDQHDFETDSDDLIEMAEGTEDVQDDDSETIEKVMDIRTGKKGATGVATTLYAVEANGQP
IADFESEKEEGETQFLIKWKGWSYIHNTWESVDSLTQRKAKGMKKLENFKKKNEELSAWL
KKASPEDLEYYNCQQELTIDLKKQFQIVERIIATRTGKSQVHSDFTSHKTTSNEPEYLCK
WMGLPYAECTWENGALIGKKFQSCIDSFNNRNVSKTIPSKDCKVLKQRPRFVALKKQPSY
IGDENLELRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPF
LLVVPLSTLTSWQREFSNWAPDMNVVVYLGDVLSRKTIRDYEWIHQQTKRIKFNTLLTTY
EILLKDKAVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQNSLKEL
WSLLHFLMPDKFELWEDFEEEHGKGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQI
LRVDMSAQQKQFYKWILTRNYKALSKGTRGSSSGFLNIVMELKKCCNHGFLIKQPEECEN
EKPQEHLQALVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILADYLAMKRYTFQR
LDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQ
AQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTILDNNSG
NSNSNPFNKEELAAILKFGAEDLFKEPEEEESELQEMDIDEILRLAETRESDQGSSATDE
LLSQFKVANFNMDESTSELEEKPVRNWDEIIPDDQRRRVEEEEKQKEMEDIYMLPRSRSS
NKRAQTNDSDSDVGSKLKLKRHTSGSESETDDSEDDKKPKRRGRPRARKNNVEGFTDAEI
RRFIKAYKKFGAPLERLEAIARDSELVDKSIADLQRLGELVHTTCLAAVQEHEEQMKENP
TEYASKGPGKRRGINIKISGVQVNAKSIIQHEEEFDSLHKAVPSNPEERSTFQLKCRVKM
PHFDVDWDVQDDAHLLLGIYEHGFGNWDQIKTDTELKLSDKILPDNPDKKPQAKQLQMRA
DYLLKTMKKEQECKDTFKTEEEVKKRKPRVKKDKTRKDELAGEISSPHLTEHTSEDGEVK
DDKAEKSPTKKKQKKDNKENKEKQGMAKKDKDKKRTKLKKEKIKSGCKGKKAQGPVHITA
GSEPVPIGEEDDELDQETFSVCKERMRPVKKALKQLDKPDEGLSVQEQLQHTRACLLKIG
DRITECLKTYSDPEHVKTWRRNLWIFVSKFTEFGAKKLHRLYKMAQKKRSQEEEKEHKKK
DDPGKKKPFRPEPSGLSRDSTGTQPSSKTHPPLNHPTGLGSHLHHYRGDWQRERKYNYPG
NSNQPWQGDRHHPYDQHRYKEHHYNSRRGHTDLYRSSNFRNPGSARKRVYDQYSNDRDHR
AHRDYYDRHPDPKRRRSDDYRSANYHQGGGGGYNQDFRRLPEQRGVPGPDHYRPFHPDKP
PPLLDPRSPQLQKSPIESLSPLERTTEPKPNTDLNRNRKP
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagaacaaagaaaaaaaggaaggagaggacgcttcgactcacagcaatgcttcg
agcaactctgcatcagaggagtctaatcgttcaggctctgagtcgggcagccagtctgaa
agtgagcagggcagtgatcgggcacactcccagcattctgagtccaacagcacatctgag
tctgagagctgctctgaatctgggagtgaatcagctggatcgaagtcacaccagaccatt
gcagagatcaaagagaaacgggtcaaaaggagagacttggctgacgtgaaaaagatgtgg
gaggaacatccagatgtttatggtgtcagaaggtccaatcggagcagacaggagcctgct
cgtctgaacattggagcagaggacagcagtgaatcagagagtgaaagtcacaaaagaaaa
gtattgagacagaaaaagaaagaaaatacctggaaagatgactcaaatgatgaagatgag
gaggaagaagacagcagttcagagagtgagcaggaagaaaaaaaagttagatccagacga
cttcctgctagaaggcctcgggccaaatcatctacagccaagcagcatcaaactcataag
ggacggaaacagaggaagcaggagacatcggaggaggaggaggaggatgatgaagatgag
gaagaggatacgccaataagactgacacggagaagagcagctacgaaagttagttacaag
gaggaccagcatgattttgaaactgactctgacgacctgattgagatggcagaggggaca
gaggatgtgcaggatgatgacagtgagaccattgagaaagtcatggacataaggactggc
aagaaaggagctactggtgttgccactacgctctatgctgtagaggccaatggacagccc
atagcagattttgagtctgaaaaggaagaaggagagactcagttccttattaaatggaag
ggctggtcctacattcacaacacatgggaaagtgtggactcactcactcagcgaaaggcc
aaagggatgaaaaaactggaaaattttaaaaagaaaaatgaggagctcagtgcttggttg
aaaaaagcctcaccagaggatttggaatattacaactgccaacaagagttaaccattgat
ctgaaaaagcagtttcagatagtggagagaatcattgcaacaagaacagggaagtcacaa
gtgcactctgattttacctcgcataagaccacatctaacgagcctgaatacttgtgtaag
tggatgggtctgccctatgcagagtgcacttgggaaaatggtgccttaatagggaaaaag
ttccagtcttgcatagatagtttcaacaacaggaatgtctccaagactatcccctcaaaa
gactgtaaggtgttaaaacagagacccagatttgtggctctaaagaagcagccctcttat
attggagatgagaacttggagctgagagactaccagttagatggactgaactggcttgca
cactcttggtgcaggtgtaacagtgttatcttagctgatgagatgggcctggggaagacc
atccagacaatttcatttctttcctacctgttccatcagcaccagctgtatgggcccttc
ctcttggttgttcccctctctacactcacatcttggcagcgtgagttcagtaattgggct
cctgacatgaacgttgtggtctacctgggggatgttttgagcagaaagacgattcgtgat
tatgaatggattcaccagcagaccaaaagaattaagtttaacacacttttgaccacatat
gaaattctattaaaagataaggctgttttggggaacataaactgggcatttcttggggtg
gatgaagctcaccggctgaagaatgatgactctctgctgtataaaacactaatagatttt
aggtctaaccacaggctactcataacaggaacaccattgcagaattcactcaaagagttg
tggtccctcctgcactttctaatgcctgacaagtttgagttgtgggaggattttgaagaa
gagcatggtaagggcagggacaatggctaccaaagtctgcacaaagtgcttgagcccttt
cttctgcggcgtgttaaaaaggatgtggagaaatcgctgcctgctaaagtggagcagata
ctcagagtggacatgtcagcccaacagaaacagttttacaagtggattctgacacggaat
tacaaagccttatctaaaggtactagaggcagttcctctggctttctcaacattgttatg
gagctgaagaaatgttgtaatcatggctttctcatcaagcagccagaggagtgtgaaaat
gagaagcctcaggaacatctgcaggcacttgttcgtggcagtggaaaacttgtgctcttg
gacaaattgctaacaagactgagggaacgaggcaatcgtgtgctcatcttttctcagatg
gtccgtatgctggacattttagctgattatctggccatgaaacgctatactttccagaga
ctggatggctccatcaagggagagcttcggaaacaagcacttgaccactttaatgcagaa
ggttcagaggatttctgttttctcttgtccactcgtgctggaggactgggcatcaacttg
gcctcagcagacactgttgtcatattcgactctgactggaaccctcagaatgacctgcag
gcccaggccagagcccacagaataggccaaaagaaacaagttaatatttatcgtctggtc
acaaaaggcactgtggaagaggatattattgaaagggcaaaaaaaaagatggtgctagac
catcttgtaatacaaagaatggacaccactggaagaacaatactagacaacaactcaggc
aattcaaattcaaatccttttaacaaggaggagttggctgctatcttgaaatttggtgcc
gaagatctgtttaaagaacctgaagaggaggaatcagagctacaggaaatggacattgat
gagatcttgaggcttgctgaaacaagggaaagtgatcaaggttccagtgccacagatgag
ctgctgtcccaatttaaggtggccaacttcaacatggatgagagcacatcagagctggag
gagaagcccgtgcggaactgggatgagataattccagatgatcagagaaggcgcgtggag
gaagaggagaaacagaaggaaatggaggatatttacatgttgccacggagcagaagctca
aataaaagagcgcagacaaatgacagcgacagcgatgttggctcaaagctgaaactgaag
cgccacacatccggttcagaaagtgagacagatgacagtgaggatgataagaagcccaag
cgacgaggcaggccacgcgcacgcaaaaacaacgtggagggcttcacagatgctgagatt
cgcaggttcataaaagcttacaagaaatttggtgctcctcttgaaaggttggaggccatt
gcacgtgattctgaactggtggataaatctatagcagatctgcagagactaggagaatta
gtgcacactacatgcctagctgcagtacaggagcatgaagaacaaatgaaagagaatccc
acagaatatgcatctaaagggccaggaaagagacgtggcattaacatcaagatatctggg
gttcaggtaaatgctaaatccattatccagcatgaggaagagtttgattctctacacaag
gctgtgccctccaatcctgaggagaggagcacatttcagctaaaatgtcgtgtgaagatg
ccacactttgatgtagactgggatgtgcaagatgatgcacatctcctgttgggcatctac
gagcatggcttcggcaattgggaccagatcaagactgatactgagctgaaactctcagac
aagattcttccagacaaccctgacaaaaagccacaggcaaagcagctgcaaatgagagct
gattacttgttgaagaccatgaagaaggagcaggagtgtaaggatacattcaaaacagaa
gaggaggtaaagaagagaaaacctcgagtaaagaaagacaagacccgaaaagatgaacta
gccggtgaaatctcctctcctcatctcactgaacatacatcagaggatggtgaagtgaag
gatgacaaagctgaaaaatcccccacaaagaagaaacagaagaaggacaacaaagagaac
aaagagaagcaaggcatggcaaagaaagataaggacaaaaaacggacaaagctcaagaaa
gaaaagattaaatcaggatgcaaaggcaagaaagctcagggccctgtgcacattacagca
ggcagtgagcctgttcctattggagaggaggatgatgaactagaccaggaaacatttagt
gtttgtaaagagcggatgaggccggtgaagaaggctcttaaacagcttgataagcctgat
gaaggcctgtcagtgcaggaacagctgcagcatacaagggcctgcctgttgaagattgga
gaccgaataacagagtgccttaaaacttacagtgacccggaacacgtcaaaacctggcgc
agaaatctctggatttttgtgtccaaattcacagagtttggtgcaaagaaattgcacagg
ctatacaaaatggctcaaaagaagcgctcccaagaggaggagaaagagcacaagaagaaa
gatgacccaggcaaaaagaagccatttcgacctgaaccttctggattgagtcgggactct
actggcacacagccatcatccaaaacacacccaccactaaatcatccaacaggacttgga
tcgcatttgcaccattataggggagactggcaaagggaacgtaaatataactacccagga
aacagtaaccagccatggcaaggtgaccgccatcacccttacgaccagcacaggtataag
gagcatcattacaacagccggcggggacacactgacttgtaccgcagtagtaacttccgg
aacccaggctcagcacgtaaacgggtgtatgatcagtacagcaatgatcgagaccatcgt
gctcaccgtgactattatgacagacatccagacccaaagaggagacgctcagatgactat
cgctctgcaaactaccaccagggtggtggaggaggctacaatcaggatttccggaggctg
cctgaacaacggggtgtcccagggcctgatcactaccggccatttcacccagacaaaccc
cctcctctgctggatccacgttctccacagctgcagaaatcgccaattgagtctctttca
cctctggaaagaaccactgaacccaaaccaaacacagatcttaaccggaacagaaaaccc
tga
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integrated database retrieval system
