Silurus meridionalis (southern catfish): 124395846
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Entry
124395846 CDS
T08004
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03020
RNA polymerase
smeo04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124395846 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
124395846 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124395846 (polr3b)
Enzymes [BR:
smeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124395846 (polr3b)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
124395846 (polr3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
MES-3_M
Motif
Other DBs
NCBI-GeneID:
124395846
NCBI-ProteinID:
XP_046720679
LinkDB
All DBs
Position
13:complement(10939985..10962908)
Genome browser
AA seq
1132 aa
AA seq
DB search
MELLQEEFGDMSPHQLAAPVDTVEEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPMEFSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVDQDRKGTVGASVTSSTHEKKSRTNMIVKQGRFYLKHNTLSEDAPICIIF
KAMGVESDQEIVQMIGTEEHVMAAFAPSLEECQKAQIFTQTQALKYIGNKVRRQRMWGGP
KKTKMEEARELLASTILTHVPVKEFNFRAKCIYLAVMVRRVILAQGNNKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPTVFLVFL
NGNILGVIRDHHKLVNTFRLMRRAGFINEFVSISTNVTDRCVYISSDGGRLCRPYIIVKN
EQPAVKNKHIEELSQGYRSFEDFLHESLVEYLDVNEENDCSIALYEHMISKDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQRPMVK
TKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALILNKASLDRGFGRCLVYKNAKCTLRR
YTNQTFDKVMGPMLDAETRKPIWRHSILDADGICSPGERVENKQVLVNKSMPTVTQTPLE
GSTQPNQPQFRDVPITYKGSTDSYIEKVMISSNAEDAFLVKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLIRYGYNYQGKDFVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLARYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggagttactgcaggaggaatttggggacatgtctccccaccagctcgctgctcctgtg
gacacagtggaggaaaaatggaagttgcttccagcctttttgaaagttaaaggtttggta
aagcagcacattgactcttttaactacttcatcaatgtggagataaaaaagatcatgaaa
gcaaatgagaagattacaagtgatgcagatcccatgtggtatctaaagtacctgaatatc
tatgtcgggatgcctgacgtggaagagagctttaatgtcaccagaccagtatctccacat
gagtgtcgactgagagacatgacttattccgcccccattacagtggacatcgagtacacc
agaggcagtcagaggatcatccgtaatgctttacctataggaaggatgccaattatgctg
cgcagttccaactgtgtgctgaccggcaagacacccatggaattctctaaactgaacgag
tgtcccttagatccagggggctatttcattgtgaaaggtcaggagaaagtcattctcatc
caggagcagctttccaagaaccgcatcatcgtggatcaagatcgcaagggcacagtgggc
gcctcggtcaccagctctacgcatgagaagaagagcagaaccaatatgatcgtgaagcag
gggcgcttttacttgaaacacaacacgctgtctgaagacgctcccatctgcatcattttc
aaagccatgggtgtggagagtgaccaggagattgtgcagatgattggtacagaggagcat
gtcatggctgcctttgcccccagtttggaagagtgccagaaggcacagattttcacccag
acacaggctctgaagtacattggaaacaaagtgcggcgtcagcgcatgtggggcggaccg
aagaaaaccaagatggaagaagccagggagctgctcgcatccactattctcacccacgta
cctgtgaaggagtttaacttcagagccaaatgcatctacctggctgtaatggtgcgcagg
gtgattctcgctcaaggcaacaacaaagtggacgaccgagattactatggaaacaagcgt
ctcgagctggctgggcagcttctgtctctgctgtttgaggatctctttaagaagtttaat
tcagagttgaagaagatcgctgaccagatcatacccaagcagagggcggcccagttcgac
gtggtgaaacacatgcggcaggaccagatcacaaacggcatggttaacgccatttctacc
gggaactggtctctgaaaaggtttaagatggacaggcagggtgtgacgcaagtgctgtca
cgtctctccttcatctcagccttgggtatgatgactcgaatttcctctcagtttgagaag
accaggaaggtgagcgggccgcgttccctgcagccctcacaatggggaatgctttgcccc
tcggacactcctgaaggggaggcttgtggtctggtgaagaatcttgctctaatgacacac
attaccactgacatggaagacggacccattattaagctggccttcaacctgggagtagag
gacgtcaatctactgtgtggagaggaactgtcctatcccactgtcttcctcgtcttcttg
aatggtaacatcttgggagtgattcgagaccatcacaagctggtcaacacattcagactg
atgagaagagctggtttcattaatgaatttgtgtctatttccaccaatgtaacggaccgc
tgcgtgtacatctcctctgatggaggacgcctttgcagaccttacattattgtgaagaac
gagcagccggctgtgaagaacaaacacattgaggagctgtctcagggctacaggagcttt
gaggactttttacatgaaagtctggtggagtatttggatgtgaatgaggagaatgactgc
agcattgctctgtatgagcacatgatatccaaggacactacacatttggaaattgagccg
ttcactttgctgggggtttgtgctgggttgattccttatccccatcataaccaatccccc
aggaacacctatcagtgtgctatgggcaagcaagccatgggtactattggctataaccag
aggaatcgaatagacacactgatgtacctattagcttatcctcagaggcccatggtaaag
accaagaccattgaattgatcgactttgagaagctacctgcaggtcagaatgctacagtg
gctgtgatgagctacagtggttatgatatagaggatgcgttgatcctaaataaggcctct
ctggacagaggttttggcaggtgtcttgtgtacaagaatgcgaagtgcacactaagacgt
tacaccaaccagacctttgacaaggtcatgggtcccatgttggatgcagaaacacggaag
cccatttggagacacagcatcctggatgctgatgggatttgctcccctggagagcgagtg
gaaaacaagcaggttctggtgaataagtctatgccaacggtcacccaaacaccactggag
ggcagtacccagccaaaccagccacagttcagagatgtgccaatcacgtacaagggctca
acggactcgtacatcgagaaggtgatgatttcttcaaacgcagaggatgcatttctagtc
aagatcctgctccggcaaacgcgtcggcccgagataggagacaagttcagcagcagacat
ggccagaaaggtgtttgtggattgattgtccctcaggaggacatgccgttctgcgactca
gggatctgtccagatattatcatgaacccacatggatacccctctagaatgactgtcggg
aagctgatcgagctattggcaggaaaagctggagtgctggacggccgttttcactatggc
actgctttcgggggcagcaaagtgaaggatgtgtgtgaggatcttattcgctacggatac
aactaccagggcaaagattttgtcacgtctggtattacaggcgaacctctagaagcctac
atctactttggtccagtgtactaccagaaactgaagcacatggtgttggataagatgcac
gcaagagctcgtggccctcgagcagtgctcaccagacagcctactgaaggtcgttcccgg
gacggcggtctccgtctgggggagatggaaagggactgtctgattggctacggggccagc
atgctactgctagagcgcctcatgatctccagtgatgcttttgaagtggatgtgtgtggc
caatgtgggctgctgggttactctggatggtgccactactgtaagtcctcgtgccacgtc
tcatctctacgcattccttatgcctgcaagctgctcttccaagagctgcagtccatgaac
atcatccctcgcctaaaactggctcgctacaacgagtga
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