Silurus meridionalis (southern catfish): 124396017
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Entry
124396017 CDS
T08004
Symbol
pdpr
Name
(RefSeq) pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial isoform X1
KO
K17509
pyruvate dehydrogenase phosphatase regulatory subunit
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124396017 (pdpr)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Mg2+- or Mn2+- dependent protein phosphatases (PPMs)
Pyruvate dehydrogenase phosphatases
Regulatory subunit
124396017 (pdpr)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
DAO
FAO_M
GCV_T_C
Pyr_redox_2
FAD_binding_2
Pyr_redox_3
FAD_binding_3
Trp_halogenase
FAD_oxidored
NAD_binding_8
HI0933_like
Motif
Other DBs
NCBI-GeneID:
124396017
NCBI-ProteinID:
XP_046720903
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Position
13:26612999..26623726
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AA seq
908 aa
AA seq
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MRGCVSSFRALSPALLPRLLSHSRCCRTRAVYNGLWSSVQFFSTAPDAQVAPLPGQARVV
ICGGGIVGTSVAYHLAKLGWTEIVLLEQGRLGAGTTRLCAGIVSVAKPIFIESQMADYSN
ALYERLEQETGVKTAFSRTGSLCLAQNQDRFLSLKRLASRLNVLGITCNIIKPKDVSKLH
PMVNIHDLVGALHLPGDAVVSSPDVNHALAVAAARHGVQIHERTSVNQVLVEKGHVKAVE
TDRGSIECEYFVNCAGQWAYELGQSSEVKVSVPLHGCEHFYLLTKPLQEPLQPTTPVVMD
MDGRIYVRSCQGGILAGGFEKNPKPIFTEGRNQLEIQNMQEDWDHFEPMLSALLRRMPSL
DSCEIHQLVNCPESFTPDMRCLMGETPGVHGYFVLAGMNSSGLSFAGGAGKYLAEWMTYG
YPSANVWSLDIKRFGNLQSSRTFLRHRVMEVMPLLYELKVPRWDFQTGRQLRTSPLYDRL
DTQGARWMEKHGFERAKYFVPPGKDLLALDQSKTFYKPDWFDIVGAEVKCCKEAACVIDM
SSFTKFELTSSGDQAMELLQWLCSNDLDVPVGHIVHTGMLNEKGGYENDCSVVRLSKNSF
FIISPTDQQVHCWSWIKKHMPADPQLHLEDVSWKYTALNLIGPRATDVLSELSYVSMTPE
HFPSLFCKEMSVGYANGIRVMSMTHTGEPGFMLYIPIEYALHVYNEVVSVGQKYGIRNAG
YYALRSLRIEKFFAFWGQDLDSFTTPLECGREFRVKFDKDTDFLGREALLRQRQEGLTRR
FIMLVLEDHDAELDLWPWWGEAIYRNGELVGVTTSSAYSYTLERHVCLGFVTSPGAQGST
NIVTPDFINRGEYEVDIAGHRYPAKAKLYPFSSLFAQQKRRKDDMGLSNFQGVTGGEPAG
GPRTGLRI
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggctgtgtgtcgagctttcgagctctgtctccagccctgctcccccggctcctc
tcccactcacgatgctgtagaacccgtgcggtctacaatggcctgtggagctcggtccag
tttttcagcacggctccggacgcccaggtcgcacctctgcccggccaggcccgtgtcgtt
atctgtggcggcggaatcgtgggaacgtcggtcgcctatcatctggccaagttaggctgg
acggagatcgtgcttttggagcaggggagactcggagctggcacgactcggctgtgtgca
gggatagtaagtgtcgccaaacccatttttattgaaagccagatggcagactattcgaac
gccctgtacgagcgcttggagcaggagaccggcgttaaaacggctttttcccggacggga
tcgctctgtttggctcagaatcaggaccgtttcctgtcgctgaagcgtctggcgtccagg
cttaatgtcttgggtataacctgtaacatcatcaaacccaaagacgtttccaagcttcac
ccaatggtgaacattcacgacctggtgggagctctacacttgcctggagacgccgtcgtg
tcttctccagacgtcaatcatgccctggccgtggcagcagcaaggcacggagtccagatc
cacgaacgaaccagtgtgaaccaagttcttgttgaaaagggtcacgtcaaagcggtggag
acggaccgaggctccattgagtgcgagtactttgtcaactgtgcaggacagtgggcgtat
gaactgggccagagcagtgaagtaaaggtgtctgtgcctctgcatggctgtgagcacttc
tatctcctcaccaaacctctacaggaacctctgcaacccacaacacctgtggtgatggat
atggatgggaggatctatgtacggagctgtcagggtggcattctggcaggaggcttcgag
aagaaccccaaacccatcttcactgagggtcgtaatcagctggagatccaaaacatgcag
gaggactgggatcactttgaacccatgttgagcgccctgctgaggagaatgccgagcctg
gattcatgcgagatccatcagctggttaactgccccgagtccttcaccccagacatgcgc
tgtctcatgggcgagactccgggggtgcacggctactttgtcctggcaggcatgaactcc
tcgggtctgtcttttgcaggaggagctggcaaatatttggcagaatggatgacttacggt
tatccgagcgccaatgtgtggtctctggatatcaaacgcttcggtaatctgcagagcagc
cgtacgtttctacgccatcgtgtgatggaggtcatgcccctgctctatgagctgaaagtg
ccaagatgggacttccagacgggcagacagttgcgcaccagccccctttatgatcgtcta
gacacgcagggggctcgctggatggagaagcatggctttgagcgggcaaaatacttcgtt
cctccaggaaaggatttgctggccttggatcagagtaaaaccttctacaagcccgactgg
tttgatatcgttggtgcggaagtgaagtgctgtaaggaggccgcgtgtgtcattgacatg
tcctccttcaccaagtttgagctcacatcatccggcgaccaggccatggagctgctccag
tggctgtgttctaatgatctggatgttccagtaggacacatcgtgcacacaggcatgctg
aacgagaaagggggctacgagaatgactgcagcgtggtacgcctgagcaagaacagtttc
ttcatcatctcaccgacagatcagcaggtccattgttggtcttggattaagaagcatatg
ccggctgacccacagctccatctagaggacgttagctggaaatacaccgcgcttaatctg
attggtcctcgggcaacagacgtgttgtctgagctctcttacgtctcgatgactccggag
catttcccctcactgttttgtaaggaaatgagtgtgggctacgctaatggaatccgagta
atgagtatgactcatacaggagagccaggcttcatgctctacatccctatagagtacgca
ctgcatgtgtataacgaggtggtgtcggtggggcagaagtacggcatccggaacgcagga
tactacgccctgcgcagcctgcgcatcgaaaagttcttcgccttctgggggcaggatctg
gactcgttcacgacgcctctcgaatgcggtcgcgagtttcgtgtcaaattcgacaaggac
acggatttcctgggcagggaggctctgctgcggcagcgtcaggaaggactgacgcgacgc
ttcatcatgctggtccttgaagatcacgacgccgagctggacctgtggccgtggtggggc
gaagccatttaccgtaacggagagctggtgggcgtgaccactagcagcgcctacagctac
acgctggagcgccacgtgtgtctgggtttcgtcacctcgccaggcgctcaaggcagcacc
aacatcgtcactcccgatttcatcaaccgcggcgagtatgaagtggacatcgccggacac
cggtaccccgccaaggccaagctttaccccttcagctcgctgttcgcccagcagaaacgc
cgcaaagacgacatggggcttagcaactttcagggtgtgactggaggtgaaccagctggt
ggtccgaggaccggattgagaatctga
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