Silurus meridionalis (southern catfish): 124396064
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Entry
124396064 CDS
T08004
Symbol
rbm28
Name
(RefSeq) RNA-binding protein 28 isoform X1
KO
K14573
nucleolar protein 4
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124396064 (rbm28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smeo03009
]
124396064 (rbm28)
Ribosome biogenesis [BR:
smeo03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124396064 (rbm28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
124396064
NCBI-ProteinID:
XP_046720978
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All DBs
Position
13:7273537..7291742
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AA seq
741 aa
AA seq
DB search
MAGLTLFVRNLPASASSDHLEEIFSEVGPVKRCFVVRDKGSEKCRGIGYVTYSMAEDAER
ALREIKDYDGQKISVVQAKKKVFEKKQGKKNKAEQKTESPPTNSEPTEEKSQQKSQGMRK
NKMKARLIIRNLSFKCSEADLNDVFSKYGTVLEVKIPLKPDGKKRGFAFVQFKNMLEAGK
ALAATNLKEIKDRRVAVDWAVSKDKFMAKQSGIAPGGKKEDEKKVTESEEENEDEEENED
EKEDDQAAEKESITQQEDDSEAESPSDDDDDDDEDDDDEEEDQSKNSEDEEDNDSDSLDA
SDDEYGDEDDEENVKKKKKQKNALPSDVNEGKTVFIRNLSFDTEEEGLEEVLLQFGELRY
VRVVVHAETGHSKGCAFAQFKTNQATEKCLAVAQTESEAGGVRVDGRKLNIVLAVSREDA
SKLKSKKVKTHTGSRNLYLAREGLIRPGTKTAEGVSESDMAKRLRFAELKKAKLKDVNIF
VSRTRLCVHNLPKSVDRKRLFKICLSAAGGGRGVRIKECHVMYDRKPVRGEPMGQSLGYG
FVEFQEHDHALQALRHLNNNPNIFTPVKRPIVEFSLEDSRKLKLKAMREQKSKMTAASDS
GAKKQSTGAQKGSEKNQESLSNHYSGFRTTPEVEHVELGDGKKRQKILPMPSHMGPKIRK
RDKGKQTANVKKVKTVPSRKERKLLPSMEKPSENKKQNAKPAKRKFQSREDDRFDRLVEQ
YKKKLTGTSKDSLIKKSKWFS
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtttgactttatttgtgcggaatttacctgcatcagcatccagtgatcacctg
gaggagatcttctctgaagtaggaccggtgaagcgatgctttgtagtcagagataaaggc
tcagagaaatgccgtggtatcggctacgtcacgtactccatggcagaagacgctgagcga
gctctccgagaaataaaggactacgatgggcaaaagatttctgtagttcaggcaaagaaa
aaagtttttgaaaagaagcagggaaagaagaacaaagctgagcaaaaaacagagagtcca
ccaaccaactctgaaccaacagaggagaaaagtcagcaaaagtcacaaggcatgaggaag
aacaagatgaaggccaggcttattatccgaaatctcagttttaagtgctctgaagcagat
ctgaacgacgtcttttcaaaatatgggacagtgctggaagtgaagatccctctgaaacca
gatggaaagaaacgaggatttgctttcgttcagtttaagaacatgctggaagccggaaaa
gccctcgcagcaaccaacctgaaagaaattaaagacagacgggttgctgtagactgggcc
gtgtcgaaagacaagtttatggcaaagcagtccggcattgccccaggaggtaaaaaagag
gatgaaaaaaaagtgactgagagtgaggaggaaaatgaggatgaggaggaaaatgaggat
gagaaagaggatgatcaggctgcagagaaagagtcaataacacaacaagaggacgactct
gaggcagaatcgccatctgatgatgatgatgatgatgacgaggatgatgatgatgaggag
gaggatcaaagcaaaaacagtgaggacgaagaggataatgattctgactctctcgatgca
tcagatgatgaatatggtgatgaggatgatgaggaaaatgttaagaagaagaagaaacag
aagaatgctcttccttcagatgtgaacgaaggaaaaacagtatttataagaaacctgtct
tttgacacagaggaagagggtttagaggaagttcttctgcagtttggtgaactcagatat
gtgcgtgttgtggtgcatgctgaaacaggacattcaaaaggttgtgcttttgctcagttc
aaaacaaaccaagcaacagagaaatgtctagcagtagcacagacagaatctgaagctggt
ggtgtgagggtggatgggaggaagctgaacattgtgctggccgtgagcagggaagacgct
tccaaactgaagagcaagaaagtgaaaacacacacaggatccagaaacctgtacctcgcc
cgagagggcttgatccgtcctggaaccaaaacagcagaaggagtttctgaatctgatatg
gcgaagaggttgaggtttgcagagctgaagaaggcaaagctgaaggacgtgaacatattt
gtgtctcgaacgcgactttgtgttcacaaccttcccaaaagtgtggaccgaaagcgcctg
ttcaaaatctgcctgtctgccgcagggggaggaagaggtgtccggatcaaggagtgccac
gtgatgtacgacaggaagccggtgcgtggtgagccaatgggtcagtcactaggctacggc
tttgtggagtttcaggagcatgatcacgccctccaagccctgcgtcatcttaacaacaac
cccaacatcttcacacctgtcaagaggcctattgtggagttttcgctggaggactcgagg
aagttaaaattgaaggctatgagggagcagaagagtaaaatgacagctgcctctgactct
ggggccaaaaagcagtcaacaggagctcagaaaggaagtgagaagaaccaggaatctctg
agcaaccattactctggcttcagaaccacaccagaagtagagcacgtggagctgggagat
ggcaaaaaacgccagaagattcttcccatgccttcacatatgggtccaaagatcaggaaa
cgggataaaggtaaacagactgccaatgttaagaaagtgaagacggttcccagcaggaaa
gagaggaagttacttccttcaatggagaaacccagtgaaaacaagaaacagaacgctaag
ccagcgaagaggaagttccaatccagagaggatgatcgatttgaccgtctggtcgaacag
tacaagaaaaaactcacaggcacatcgaaggactctctcatcaagaagagcaaatggttt
agttga
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