Silurus meridionalis (southern catfish): 124396099
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Entry
124396099 CDS
T08004
Symbol
pld3
Name
(RefSeq) 5'-3' exonuclease PLD3
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00564
Glycerophospholipid metabolism
smeo00565
Ether lipid metabolism
smeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
124396099 (pld3)
00565 Ether lipid metabolism
124396099 (pld3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124396099 (pld3)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
124396099 (pld3)
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
124396099 (pld3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
DUF7436
MRAP
Motif
Other DBs
NCBI-GeneID:
124396099
NCBI-ProteinID:
XP_046721030
LinkDB
All DBs
Position
13:19228758..19257295
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AA seq
482 aa
AA seq
DB search
MSASMKSDVAYEKMADVESSLLKPHKYSRCILVITSLIAVVLLLFSLQTFLIPSIITSGL
NKNPPIMQTCTDTCRLVLLESIPVGMEFNSSVGHPSIYQAWRSLLSEAQSSLDIASFYWT
LTNEDTKTQEPTANQGEEILQELVQISGKISVRIAVNTPTDKQPHHDIQQLINAGANVRD
VNLRDLTSGVLHTKFWVVDKKHVYIGSANMDWRSLTQVKELGAVIYDCKCLAEDLEKIFE
AYWFLGDSKIIPSPWPSQYTTAYNKDTPMQLAINGTDSGVYLSSSPPSLCAEGRTSDLQA
ILSVISDAQQFVCIAVMNYLPTMEFTSFKRYWADIDTELRRVAFERKIHVRLLISCWDST
SPLMFPFLRSLASVQDSKSNLDIQVKIFIVPSSASQKKIPFARVNHNKYMVTDRIAYIGT
SNWSGDYFVNTAGSALVVNQTTTSSSESTVREQLQAVFERDWDSSYSTPLNQDSNLEQIC
AM
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccagcatgaagtctgatgttgcatatgaaaagatggctgatgtggagtcaagt
cttctgaagcctcacaagtattccaggtgtattctcgtcatcacctctctcatagctgtg
gtgcttttgctgtttagcctccaaacctttcttattccctcgatcataacatctggccta
aataaaaatcctcccatcatgcagacctgcactgacacctgcagattggtcctgttggag
agtatcccagtaggaatggaattcaactcttctgttggtcatccatccatctatcaggca
tggcgaagcctcttgtcagaggcacagagcagtctggacattgcctccttctactggacg
ctcactaacgaggacacaaagacacaagagcctactgccaatcagggtgaggaaattctc
caggaacttgtacagatttctgggaaaatctctgtgcgcattgctgtgaacactcctaca
gacaaacagccacatcatgatatccagcagctcattaatgcaggtgctaatgtgagggat
gtaaacttgagagatttaacatccggggtgctgcacacgaagttctgggtggtcgacaaa
aagcacgtttacattggtagtgccaacatggactggagatcgttaactcaggtgaaggag
ctcggtgctgtaatatatgactgtaagtgccttgctgaagacctcgagaaaatatttgaa
gcctattggttccttggtgacagcaagataataccatctccctggcccagccaatacact
acagcctataacaaagacacaccgatgcagctggcaatcaatgggacagactctggtgtt
tacctgtcgagttctcccccgtcgttgtgtgctgagggaagaacttcagatcttcaggca
attttaagcgtcattagtgacgcacagcaatttgtttgcattgccgtgatgaactacctg
cccactatggagttcacatcttttaaaagatactgggcggatattgacactgagctgagg
cgtgtggcattcgagagaaagattcatgtgcgtttgctgatcagctgctgggatagcacc
tctccgttaatgtttccatttttacgctcgcttgcatctgtgcaggattcaaagagtaat
ttggatattcaggtgaaaatcttcattgttcctagcagtgcgagtcaaaagaaaatcccc
tttgctcgagtgaaccataacaagtacatggtgacagacagaattgcttatataggaacg
tccaactggtctggtgattactttgtgaacacagcgggctcagcgttagtggtgaatcag
actacaacttcttcctcagaatccacagtgagagaacagctgcaggctgtgtttgaaaga
gactgggattcttcctacagcactccactcaaccaggacagcaacctggaacagatatgt
gcaatgtaa
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