Silurus meridionalis (southern catfish): 124396160
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Entry
124396160 CDS
T08004
Symbol
cpt1b
Name
(RefSeq) carnitine O-palmitoyltransferase 1, muscle isoform
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00071
Fatty acid degradation
smeo01212
Fatty acid metabolism
smeo03320
PPAR signaling pathway
smeo04148
Efferocytosis
smeo04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
124396160 (cpt1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124396160 (cpt1b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124396160 (cpt1b)
03320 PPAR signaling pathway
124396160 (cpt1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124396160 (cpt1b)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
124396160 (cpt1b)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
124396160 (cpt1b)
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Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
PANTS-like
PoNi_C
Motif
Other DBs
NCBI-GeneID:
124396160
NCBI-ProteinID:
XP_046721136
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Position
13:6990889..7000053
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AA seq
770 aa
AA seq
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MAEAHQAVAFQFTVTPEGIDLRLSREALKHIYLAGVTSWRKRAILFRNGIRMGVYPASPS
SWLFVVIAIMSSMYARLDPSMGMINSIKKVLPASDRLTAQTQTVLSTILFATGLWFSLIM
LLRYTLKLLLSYHGWIFEPHGKLSMSTKLWISLLKLFSGRRPLLYSFQGSLPRLPVPSID
DTIQRYLESVRPLLEDDRYKQMEIVANDFKKDQAPKLQKYLKIKSWWANNYVSDWWEEYI
YLRGRGPIMVNSNFYTMDLLYMIPTHRQSARAGNVVHAILQYRRKLERGEHAPMRALGVV
PMCSYQYERMFNTTRIPGIETDCIQHLRNRKHLVVYHRGRFFKVWMYYGGRHLLPAELEQ
QFQRILNDTTEPHAGELKLASLTAGNRVPWAKARHKYFSGGVNKTSLDAIETAAFFLTLD
DEAHGYDAENPRSMDLYAKSLLHGKCYDRWFDKSFTLVVYKNGKIGVNTEHSWADAPIVG
HMWEDILATDFLRLGYTEEGHCRGDINKELAPPTRLHWDIQKECQEIIEASYSVAKELSD
DVDFCACLFEEFGKGLIKKCRTSPDAFIQLALQLAHYRDKGAFCLTYESSMTRMFREGRT
ETVRSCTIESTAFVRAMEDKTSTNEQRLALFRTAAEKHQNMYRLAMTGAGIDRHLFCLYV
VSKLLDIKSPFLNQVLSEPWRLSTSQTPQQQLNLVDILKFPKYVGAGGGFGPVADDGYGV
SYIIVGENLITFHISSKFSSPETDSHRFGRNIRQAMLDIRTLFNQKEKAK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcgcaccaggcggtggccttccagttcaccgtcacaccagagggtattgac
ctgcgtctcagccgtgaggcgctcaaacacatctacctggctggagtgacgtcatggaga
aaacgtgcaattctgttccgaaatggcatccgaatgggggtctatccagccagtccctca
agctggttatttgtggtaattgcgataatgagttccatgtatgccagactggatccatcc
atggggatgattaacagcatcaaaaaggttttacctgcaagtgatcgtctcacagctcaa
actcagacggtgttgagcacaatcctgtttgccacaggactgtggttctctctgattatg
ctgctgcgatacaccctgaaacttctgctctcctaccatggctggatctttgagccacat
ggcaaattgagcatgtctaccaaactttggataagcctgttaaagctgttttctggtcgc
cggccgttactctacagtttccagggctctttgcctaggctgcccgttcccagcattgat
gacaccatccagaggtatcttgagtcagtccgccccctactggaggatgacagatataaa
cagatggaaattgtggccaacgacttcaaaaaggaccaagcccctaaactacaaaaatat
ctaaagataaagtcctggtgggccaacaattatgtgagtgactggtgggaggagtacatc
tacctgaggggccggggaccaatcatggtgaacagtaacttctacaccatggatctgctg
tacatgatccccactcacaggcagtcagctcgagcaggaaacgtggtccatgctatcctg
caatatcggcgcaaactagagcgaggagaacatgctccgatgagagctctaggggtggtg
cccatgtgctcctatcagtatgagagaatgtttaacaccactcgaatccctggcattgaa
acagactgtattcagcacctgaggaacaggaagcacctggttgtgtatcacagaggacgc
ttctttaaagtgtggatgtactatggtggtcgtcatctcttgcctgccgagttggagcag
cagtttcagcgtattctgaatgacaccacggagcctcacgctggagaactcaaactggcc
tcgctcactgctgggaatagagtcccatgggccaaagcacgacacaaatacttcagtggt
ggtgtaaataagacgtctctggatgccatcgagacggctgcttttttcctcactctggat
gatgaagcacatggatatgacgctgaaaatccaaggtcaatggatctctatgccaagtcc
cttctacatggaaagtgctatgacaggtggttcgataaatccttcacccttgttgtctac
aaaaatggtaaaataggggtgaatactgagcactcatgggcagacgctcccattgttgga
cacatgtgggaggatattttggctactgactttctccgcttgggctacactgaagaggga
cactgcagaggagacattaacaaagagttagctccaccaaccaggctgcattgggacatt
caaaaagagtgtcaggagattattgaggcatcgtattcagtagccaaggagctctctgat
gatgtggatttctgtgcctgtctattcgaggagtttggaaaaggcctgattaagaaatgc
agaacaagtcctgatgctttcatccaactagcgctacagcttgctcactacagggataaa
ggtgcattctgtcttacgtacgagtcctcaatgacacgcatgttccgggagggacggact
gagacggtgcgctcctgcaccatagaatccactgcctttgtacgagcaatggaggacaag
acctccacgaatgaacaacgtctggcgctattccgaacagcagcagaaaaacaccagaac
atgtaccgtctggccatgacaggagctggtatcgaccgccatcttttctgcctctacgtc
gtctccaaattactggacataaaatcacctttccttaatcaagttctttcagaaccttgg
cgtctctccaccagccagacgccacagcaacagctcaaccttgttgatatcctgaagttc
ccgaaatatgtaggagcaggtggtggctttggccctgttgctgatgatgggtatggagtt
tcttatattattgttggggaaaatctcatcacattccacatttccagcaagttctccagt
ccagaaacagactctcatcgttttggccggaacatcaggcaggccatgctggacataaga
acgctgttcaaccaaaaggagaaggccaagtga
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