Silurus meridionalis (southern catfish): 124396254
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Entry
124396254 CDS
T08004
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04115
p53 signaling pathway
smeo04120
Ubiquitin mediated proteolysis
smeo04137
Mitophagy - animal
smeo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124396254 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124396254 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124396254 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
124396254 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124396254 (siah1)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124396254 (siah1)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
124396254 (siah1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
124396254
NCBI-ProteinID:
XP_046721312
LinkDB
All DBs
Position
13:12726400..12746890
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AA seq
330 aa
AA seq
DB search
MSPTARLQPVYSWKGVFKLFTCVAARTANKPKEVHTFQEKKIALLGNHMDEEMSRQTATA
LPTGTSKCAPSQRVNTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCC
PTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSCPCPG
ASCKWQGSLDAVMPHLLHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLV
LEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIM
NSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccaccgctaggctgcagcctgtctactcatggaagggggtgttcaagctcttc
acatgcgtagctgctcgaacagccaacaagcctaaagaggtccacacatttcaagagaag
aaaatagccttactggggaatcatatggacgaagaaatgagtcgccagactgccaccgcg
ctgcccacaggaacctcaaagtgcgccccctcccagcgtgtaaacaccacagcctctaac
agtgacctagccagcctgttcgagtgcccggtgtgttttgactatgtgctgcctccaatc
ctgcaatgccagagcggccacctggtgtgcagcaactgccggcccaagctgacttgctgt
ccgacatgccgaggccctttgggctccatccgtaacctggctatggaaaaggtagccaac
tcggtgctgttcccatgcaagtacgcctcgtcgggctgcgaagtgacgctgccgcacaca
gacaaagctgagcacgaagagctgtgcgagttccggccgtattcgtgcccatgtccgggt
gcgtcgtgcaaatggcagggctcactggacgcagtcatgccgcacctgctgcaccaacac
aagtccataaccacactacagggcgaggacatcgtcttcctggccacggacatcaacctg
cccggtgctgtcgactgggtaatgatgcagtcctgcttcggtttccacttcatgctggtg
ctggagaagcaggagaagtatgatgggcaccagcagttctttgccatcgtgcagctgatc
ggcacacgcaagcaggcggagaacttcgcctatcggctggagctgaacggccatcggcgg
cgcctcacctgggaagccacgccgcggtccattcatgagggcattgccacagccatcatg
aacagtgactgtctagtgtttgacacctccatcgcccagctgtttgctgaaaatggcaac
ctgggaatcaatgtcaccatttccatgtgctga
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