KEGG   Silurus meridionalis (southern catfish): 124396254
Entry
124396254         CDS       T08004                                 
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04115  p53 signaling pathway
smeo04120  Ubiquitin mediated proteolysis
smeo04137  Mitophagy - animal
smeo04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    124396254 (siah1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    124396254 (siah1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    124396254 (siah1)
  09143 Cell growth and death
   04115 p53 signaling pathway
    124396254 (siah1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smeo04121]
    124396254 (siah1)
Enzymes [BR:smeo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124396254 (siah1)
Ubiquitin system [BR:smeo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    124396254 (siah1)
SSDB
Motif
Pfam: Sina_TRAF Sina_ZnF Sina_RING Trm112p
Other DBs
NCBI-GeneID: 124396254
NCBI-ProteinID: XP_046721312
LinkDB
Position
13:12726400..12746890
AA seq 330 aa
MSPTARLQPVYSWKGVFKLFTCVAARTANKPKEVHTFQEKKIALLGNHMDEEMSRQTATA
LPTGTSKCAPSQRVNTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCC
PTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSCPCPG
ASCKWQGSLDAVMPHLLHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLV
LEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIM
NSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq 993 nt   +upstreamnt  +downstreamnt
atgtctcccaccgctaggctgcagcctgtctactcatggaagggggtgttcaagctcttc
acatgcgtagctgctcgaacagccaacaagcctaaagaggtccacacatttcaagagaag
aaaatagccttactggggaatcatatggacgaagaaatgagtcgccagactgccaccgcg
ctgcccacaggaacctcaaagtgcgccccctcccagcgtgtaaacaccacagcctctaac
agtgacctagccagcctgttcgagtgcccggtgtgttttgactatgtgctgcctccaatc
ctgcaatgccagagcggccacctggtgtgcagcaactgccggcccaagctgacttgctgt
ccgacatgccgaggccctttgggctccatccgtaacctggctatggaaaaggtagccaac
tcggtgctgttcccatgcaagtacgcctcgtcgggctgcgaagtgacgctgccgcacaca
gacaaagctgagcacgaagagctgtgcgagttccggccgtattcgtgcccatgtccgggt
gcgtcgtgcaaatggcagggctcactggacgcagtcatgccgcacctgctgcaccaacac
aagtccataaccacactacagggcgaggacatcgtcttcctggccacggacatcaacctg
cccggtgctgtcgactgggtaatgatgcagtcctgcttcggtttccacttcatgctggtg
ctggagaagcaggagaagtatgatgggcaccagcagttctttgccatcgtgcagctgatc
ggcacacgcaagcaggcggagaacttcgcctatcggctggagctgaacggccatcggcgg
cgcctcacctgggaagccacgccgcggtccattcatgagggcattgccacagccatcatg
aacagtgactgtctagtgtttgacacctccatcgcccagctgtttgctgaaaatggcaac
ctgggaatcaatgtcaccatttccatgtgctga

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