Silurus meridionalis (southern catfish): 124396256
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Entry
124396256 CDS
T08004
Symbol
chrna3
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-3
KO
K04805
nicotinic acetylcholine receptor alpha-3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124396256 (chrna3)
04082 Neuroactive ligand signaling
124396256 (chrna3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124396256 (chrna3)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
124396256 (chrna3)
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
FtsK_alpha
Motif
Other DBs
NCBI-GeneID:
124396256
NCBI-ProteinID:
XP_046721318
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Position
13:25230152..25239900
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AA seq
553 aa
AA seq
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MNTTLFLVTPVCYFLLFNILFHSGTCSEAEHRLFSGIFANYNQYIRPVENVSDPVIVQFE
VSMSQLVKVDEVNQIMETNLWLRHIWNDYKLRWNPKDFGGVEFIRVPSNRIWKPDIVLYN
NAVGDFQVDDKTKALLRYNGDVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWTYDKA
KIDLVLIGSTINLKDFWESGEWMIIDAPGYKHDIKYNCCEEIYTDITYSLYIRRLPLFYT
INMIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIG
EYLLFTMIFVTLSIVITVFVLNVHYRTPKTHSMPRWVRHVFLSLLPRIMFMTRPERGPGK
HKSFRASHRSCSLHPPNTFPQHMNKQHGLPGSLSRRTPLLLSTELNTLSEAVKATSSFLC
RDGRCTCCMRQLSTKLPTDGTGVAGVGTSGAISGAAIIVGSGAGGSSPCSSSDSLDGGLL
TLCTLSPEVQDAIESVKYIAENMKLQNEAKEVQDDWKYVAMVIDRIFLWVFILVCILGTA
GLFLQPLLMGEDM
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaacactacgctcttccttgtcacccctgtgtgctactttctcctttttaatatcctt
ttccacagtggaacgtgttctgaggctgagcatcgactcttttctggcatctttgccaac
tataaccagtacatcagaccagttgagaatgtctctgacccagtcatagtccaatttgaa
gtgtccatgtcccagcttgtgaaagtggatgaagttaaccagattatggagacaaatctt
tggctaagacacatatggaatgactacaaattgaggtggaatcccaaagattttggaggt
gtggagttcatccgtgttccttctaacaggatctggaagccagacattgtgttatataac
aatgcagtgggagacttccaggtggatgataaaaccaaagctcttcttcgctacaatgga
gatgtcacatggattcctcctgccattttcaaaagctcatgcaagattgatgtcacctac
tttcccttcgactaccagaactgcaccatgaagttcggctcgtggacttacgacaaggcc
aagattgacttggtacttattggttccacaatcaacctgaaggatttctgggagagcgga
gagtggatgattattgatgcgccaggctacaagcatgacattaaatacaactgttgcgag
gagatctacacggatattacttactcgctctacatccgtcgtctgccccttttctacacc
attaacatgatcatcccttgcctgctcatctcattcttaactgttctcgtattctatctt
ccatcagactgtggggaaaaggtgacactttgcatctcagttctcctctccctcactgtc
ttcctcttggtcatcactgaaactattccttctacctctctggtaattccactaattggt
gagtacctcctcttcaccatgatctttgtcacactttccatagtcatcaccgtttttgtg
cttaatgtgcattaccgaacacctaagacccattccatgccacgttgggtgcgtcatgta
ttccttagcctccttcccagaattatgttcatgaccaggcctgagcgaggtccaggaaag
cacaaaagtttcagagcttctcatcgatcatgttctctccatcctcccaatacctttccc
caacatatgaacaagcagcatggcctaccaggaagcctttctcggcgcactccgcttttg
ctcagtaccgaactcaacaccctgagtgaagctgttaaggcgacctcaagtttcttatgc
agagatgggagatgtacctgctgcatgaggcagctctctactaaactacccacagatgga
actggagtggcaggagtgggtacttcgggcgcaattagtggagcagccataatagtagga
agtggagcaggaggaagcagcccttgttcgagctctgattctttggatgggggacttttg
actctctgcacactgtcaccagaagttcaagacgctatcgagagcgttaagtacattgca
gagaatatgaagctgcaaaatgaagccaaagaggtccaggatgactggaaatacgtggcc
atggtgattgacagaatcttcttgtgggtgtttatcctggtgtgcattctgggaactgca
ggactctttttacagccccttctcatgggagaagatatgtga
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