Silurus meridionalis (southern catfish): 124396347
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Entry
124396347 CDS
T08004
Symbol
cavin1a
Name
(RefSeq) LOW QUALITY PROTEIN: caveolae-associated protein 1
KO
K19387
caveolae-associated protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124396347 (cavin1a)
04131 Membrane trafficking [BR:
smeo04131
]
124396347 (cavin1a)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
124396347 (cavin1a)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
124396347 (cavin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTRF_SDPR
DUF6241
Motif
Other DBs
NCBI-GeneID:
124396347
NCBI-ProteinID:
XP_046721406
LinkDB
All DBs
Position
14:complement(6505454..6524776)
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AA seq
440 aa
AA seq
DB search
MAMAETNLKLDHVALREISDDDDDEVVLVTAAAKTSVTTPASNRKHVDEDDSDDEDDDHE
VDLKLGLENSDSQKSEAQATGMMVLALLDKIIGVVDQIQLTQNGLESRQMSMEKNMTSIQ
SELNKLAKSQGGTAGTATKLLEKVRKVNVNVKSVRGELERQAGQIKKLENNEHELLKRKN
FKVLIFQMRXDEIRLDSALLSLCRKTRASEAHCETRGSSKXGGAHVLREGEQGTDDVVEV
EEIVEESRVARIKRSGLQRVDEIKKAFSKEQMEKTKQRTKENLEKTRQRTKENLEKTRVR
TRENLQKTRVTIGKKMGKLGTKIRPSKERKEKIRVSREKIKKSRKSENKVYARSRITTYR
VPPFTFYVKKIREGVEVEPEPEEELEDEEVEELQAEDQEDEKVEEAELVNLRSPEVALEA
AEYSQLVIKDSVQPQGKASQ
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggccatggccgagacgaacctcaaactggatcatgtggctcttagggaaatctctgac
gacgacgatgacgaagtggttctggtcacagcggcggccaaaacttcagtaaccactccg
gcttccaaccgcaaacatgtagacgaagatgatagcgacgatgaagatgatgatcacgag
gtggatctgaagctgggactggaaaacagtgactcccagaaatccgaagctcaggctacg
ggcatgatggttctggctctcttagacaagatcatcggcgttgtggatcagatccagctg
acacagaatggcctggagtcccggcagatgagcatggagaagaacatgacgagcatccag
agcgagctgaacaagctagccaagagccagggcggcacagcagggacggccactaagctc
ttagagaaggtccgcaaggtaaacgtgaacgtgaagagcgtacggggcgagctagagagg
caggcgggtcagatcaagaagctggagaacaacgagcatgagctgctcaagaggaagaac
ttcaaagtgctcatcttccagatgagatgagatgagattagattagattcagctttattg
tcattgtgcagaaaaacaagagccagtgaagcccactgtgaaacccgaggcagcagtaag
tgaggaggtgcacatgtgctgcgtgaaggagaacaaggcacagatgacgtggtggaggtc
gaggaaatcgtggaggaatcacgggtggcacgcatcaagcgcagcgggctgcaacgtgtg
gatgaaatcaagaaagctttcagcaaggagcaaatggagaagaccaagcagcgaaccaaa
gagaacctagagaaaacccgtcagcgaaccaaggaaaacctggagaagacacgtgtcaga
actcgtgagaaccttcagaaaaccagggtgactattgggaagaagatgggcaagctcgga
acgaagatcagacccagcaaggagcgcaaagagaagatccgagtgtcccgtgagaagatc
aagaagtcacgcaaatccgagaacaaggtttacgcccgctcaaggatcaccacttaccga
gtaccaccgttcaccttctacgtaaagaaaatccgtgagggcgtagaggtggagccagag
cctgaagaagagctagaggatgaggaagttgaagagctgcaagccgaggaccaggaagat
gaaaaggtggaggaggccgagctggtgaatctgagaagccctgaggttgcgcttgaggcc
gccgaatattcgcaactcgtaatcaaggattcggtgcagccacaagggaaagcaagtcaa
tga
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