Silurus meridionalis (southern catfish): 124396360
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Entry
124396360 CDS
T08004
Symbol
zgc:86896
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
smeo04517
IgSF CAM signaling
smeo04519
Cadherin signaling
smeo04530
Tight junction
smeo04810
Regulation of actin cytoskeleton
smeo05100
Bacterial invasion of epithelial cells
smeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124396360 (zgc:86896)
04519 Cadherin signaling
124396360 (zgc:86896)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124396360 (zgc:86896)
09144 Cellular community - eukaryotes
04530 Tight junction
124396360 (zgc:86896)
09142 Cell motility
04810 Regulation of actin cytoskeleton
124396360 (zgc:86896)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124396360 (zgc:86896)
05100 Bacterial invasion of epithelial cells
124396360 (zgc:86896)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124396360 (zgc:86896)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124396360 (zgc:86896)
Membrane trafficking [BR:
smeo04131
]
Others
Actin-binding proteins
Arp2/3 complex
124396360 (zgc:86896)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
124396360 (zgc:86896)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Rax2
BNR_3
Fibrillarin
Motif
Other DBs
NCBI-GeneID:
124396360
NCBI-ProteinID:
XP_046721418
LinkDB
All DBs
Position
14:3086935..3096661
Genome browser
AA seq
356 aa
AA seq
DB search
MSLYSFGLEPLSCHAWNKDRTQIAISPNSSVVYIYQKKGKEWSKIHELKEHSGRITGIDW
APESNRIVTCASDRNAYVWTPKDGVWKPTLVLVRINRAATCVKWSPLENKFALGSGAKLI
SVCYFEKENDWWLSKHIKKGICSTVLSLDWHPNNILLAAGSADFHCRVYSTYIKEIEDKP
GPTPWGAKMPFGEMLLENKDCNGWVHSVAFSPSGDTLAWVSHDSSISVADATQGKEVTQL
TTEHLPLLSVLYTSETEIVAAGHDCCPYQFSYKGLGKLEFVRKLGIAKQTSKNSMSAMQH
FRNLDKKATTDDEDELTSLHQNSITQLCVVEGEKSKVGKFSSISLDGAMVLWEFKP
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtacagcttcgggttggagcctctgtcctgtcacgcctggaacaaagaccga
actcagatcgccatcagccccaacagcagtgttgtgtacatttaccagaagaaggggaag
gagtggagcaaaatccacgagctgaaggagcacagcgggcgaatcacgggaatcgactgg
gccccggagtcgaaccgtatcgtgacgtgcgcctcagacagaaacgcctacgtgtggaca
ccgaaggacggcgtgtggaagccaactctcgtcctcgtccgcatcaacagagccgccacg
tgtgtcaagtggtcacctctggagaacaagttcgctctcggaagcggagccaaactcatc
tctgtgtgttactttgagaaagagaacgactggtggctcagtaagcacataaagaaaggg
atctgctcgacggtgctcagtctggactggcatcctaataacatcctgctggctgccgga
tcagccgatttccactgcagggtttactccacatatattaaggagatcgaggacaagccc
ggcccgacaccatggggagccaagatgccgttcggcgaaatgctactggagaataaagac
tgtaacggctgggtgcacagcgtggccttctctccatctggagacactctggcctgggtc
agccacgacagctccatcagcgtcgccgacgccacgcagggcaaagaggttacgcagctg
actacagaacatctcccactgctcagtgtgctgtacaccagcgagaccgagatcgtggct
gcgggccatgactgctgtccctaccagttctcctacaaggggctcggcaaactggagttt
gtgcgaaagttgggaatcgccaaacagacgtccaagaacagcatgtcggccatgcagcac
ttccgcaacctggacaagaaggccacgaccgacgatgaggacgagctgacctctctacac
cagaacagcatcacccagctgtgcgtggtggaaggagagaagagcaaagtggggaagttc
agtagcatcagtctagatggagccatggtgctctgggaattcaagccttaa
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