Silurus meridionalis (southern catfish): 124396372
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Entry
124396372 CDS
T08004
Symbol
spns1
Name
(RefSeq) protein spinster homolog 1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeo02000
]
124396372 (spns1)
Transporters [BR:
smeo02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
124396372 (spns1)
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
OATP
Sugar_tr
MFS_4
Motif
Other DBs
NCBI-GeneID:
124396372
NCBI-ProteinID:
XP_046721436
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Position
14:complement(8882376..8894754)
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AA seq
505 aa
AA seq
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MSFGNSTTDTTPFFSDDEGEGTEVKGEARPNPPEEECASGVSNSRALMTVVVLCYINLLN
YMDRFTVAGVLPDIEKFFAINDGTSGLLQTVFICSYMFLAPVFGYLGDRYNRKLIMCVGI
SLWSLVTLASSYVSRDHFWALLLTRGLVGIGEASYSTIAPTIIADLFIKEKRTAMLSVFY
FAIPVGSGLGYIVGSAVDKRAQDWHWALRVTPALGLIAVFLLVFVVKEPKRGAIEARPEH
TLHRTSWIADMKALFRNTSFILSTFGFTSVAFVTGSLALWAPAFLFRAAVFTGEKQPCIK
EPCDTSDSLYFGVITCVTGVLGVAMGGAVSQRLRMKTPRADPLVCAAGLLLAAPFLYLSI
IFAQGSTIATYVFIFFGEMFLSMNWAIVADILLYVVVPTRRSTAEAFQIVLSHLLGDAGS
PYLIGVVSDSLKQTDSYMWQFRSLQISLLLCTFVAVVGGAFFLATALFIEKDRHLAENYV
PTDDAPIVVPKRGRSTKVSVSSVLV
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcggcaattcgaccacagataccacacccttcttctcggatgatgagggggag
gggacagaagtgaagggggaggcccggccaaatcccccggaggaagagtgtgcaagtgga
gtatccaatagccgagcattgatgaccgtggtggtcctttgctacattaacttgttgaac
tacatggacaggtttactgtagcaggtgtgcttcctgatattgagaagttcttcgccatc
aatgatggcacatctgggctgcttcaaactgtctttatctgcagctacatgtttcttgct
cctgtctttggctatctgggagacaggtacaacaggaagttgatcatgtgtgtgggcatc
agcttatggtctttagtgacattggccagctcctacgtttccagagatcatttttgggct
ttgttgctgacgcgggggcttgtagggatcggtgaggccagttactcgaccattgctcct
accatcatcgcagaccttttcattaaggaaaagagaaccgccatgctctctgtcttttac
tttgccatccctgtgggcagtggtctaggttatatagtaggatcagcagtggataaaagg
gcacaagactggcactgggctctgagggtgacgcctgctttaggtcttatagcagtgttt
ttgttggtgtttgtggtgaaggagcctaagcgtggtgctattgaagcccggcctgagcac
accctgcataggactagctggattgcagacatgaaggctctcttcaggaatacgagtttt
attctgtcaacatttggcttcacgtcagtagcctttgtcacaggatcgcttgctctttgg
gctcctgccttcctcttcagggcagcagtcttcactggagagaagcagccgtgtataaag
gagccgtgcgacacctctgacagcctgtattttggcgtcatcacgtgtgtgactggtgtg
ttgggtgtagcgatgggtggagcagtcagtcagcgtctgagaatgaaaacgccacgtgct
gacccactcgtgtgtgccgctggcctcctccttgccgctcctttcctctatctgtcaatc
atctttgcccagggcagcaccatagctacctacgtcttcatcttttttggtgagatgttc
ctctcgatgaactgggcaatcgttgctgacatcctgctgtatgttgttgtccctacacgg
cgctccactgcagaggctttccaaatcgtactctctcacctgctaggagatgcagggagt
ccctacctaataggagtggtgtcggactcactgaagcaaacggattcttacatgtggcag
ttccgctctttacagatctcactcttgctctgtacttttgtcgctgtggtgggtggagcc
tttttcctggccacagccctttttattgaaaaagaccgacatcttgctgagaattatgtt
cccacagacgatgcaccgattgtcgtccctaaaagaggaagatccacgaaggtgtctgtg
tcaagtgttttagtttga
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