Silurus meridionalis (southern catfish): 124396386
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Entry
124396386 CDS
T08004
Symbol
abca3b
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124396386 (abca3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeo02000
]
124396386 (abca3b)
Transporters [BR:
smeo02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
124396386 (abca3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_22
RsgA_GTPase
AAA_23
AAA_15
SRP54
AAA_29
Motif
Other DBs
NCBI-GeneID:
124396386
NCBI-ProteinID:
XP_046721463
LinkDB
All DBs
Position
14:complement(16744536..16785032)
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AA seq
1710 aa
AA seq
DB search
MAVWRQFGLLLWKNYLQQKRQILVTLLEITLPLMFSAILIVLRQKVSFTNYPNATHYDGF
LLEWPPHKLPSNLQLAYVPANSSIVRQIAEDVQLSLEQGFISAVRGFETEHQFEEFVKTD
PESAKILAAVVFEHSFSHDDEPLPLQVNYHLRFTYSPRNAPTKEKSELNPNNDLDWHTLS
LFPLFQLPGPREQHDLYGGTPGYYREGFLMVQHAVDRAIMKAYNRTAATALFMQTRVVLT
RFPYPSFIYDVFILAIQNQLPLLLVLSFTYTSLNIVRAIVQEKERKLKEYMRMMGLSNWL
HWSAWFLMFFLFLAISIFFVTMLCCVRVSPNGAVLTYSDPTLVFVFLLVFAVATISFCFM
ISSFFSRANVAAAASGFLYFFSYLPYLFLWPRYDLLSHAQKVSACLISNVAMAMGAQLIG
MFEGKGTGIQWRNLFEPVTVDDDFSLAQVLGLLLLDAILYSLVAWYMEAVFPGEYGVPRP
WYFFILPSYWCNSPRVTLLKEKEEEEDAEKALKGEFMEEEPTGLVSGVKIKHLAKVFKMG
NKTKEAVKDLTLNMFEGQITVLLGHNGAGKTTTLSMLTGLFPPSSGRAYINGYDICQDMV
LIRRSLGLCPQHDVLFDNLTVREHLLFYAQLKGYPREKIPDEVDRIIRILNLEDKRNARS
KTLSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKKGRTILLTTHF
MDEADLLGDRIAIMASGELQCCGSPLFLKNKYGAGYHMVIVKDALCNVSEISRLVHMYVP
NATLESSAGAELSYILPKESTSRFELLFAELEMNREELGIASYGASVTTMEEVFLRVGKL
VDSSLDIQAIQLPALQYQHERRSHDWTVDDTSSISGMTDVTDFTDSGTLISEDCSNIKLN
TGAKLYLQQFYAMFLKRALYSWRNWKVMVAQFLVPLIFTAVALVVAQTLPGHHKSPGLPL
ALNRYGPTTVPMALDSNAGPLARALAVAYTAQLGAQRATPVTNLTDFSEYVLNNAMREGG
AFNERCVVGAAFRGQTSRFAEITGYFNNQGYHTPATALMLVDNALYRLLAGPNASIHTGN
KPMPRNMSETAQSQLSEGQTGFAIAINLMYGMASLASTFALLLVIERSVKSKHVQRVSGV
HLSNFWFSALLWDLINFALPCLLMLVMFRAFGVKAFVEENHLVDVLLLLLLYGWAVIPLM
YLLSFLFSSAATAYTRLTIFNIVSGTASFLAVTIMTIPELQLQNLSHLLDKVFMLFPNYC
LGMSFSHFYQNYEIISFCTTSSFTKEICKICNITYQLNYFSMNEPGVGSYLVAMSLQGVV
FLVLLFIIELQCINMFFSLCRSCKKGMLVAEEAFQPEDRDVADERKRVLECQPVVESMVG
SPLILQELTKVYPGSQSLLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDETVTAG
DAFIDGYSILREVKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPEIYVFACVENV
LRSLLLEPHADKLVRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAVT
RTRESGKAIVITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKIRMG
ADLEEMELQLFKDFIESTFPGSLLKDEHQGMVHYHLTDKALTWAQVFGTLEAAKEKYSIE
DYCVSQISLEQVFLSFAQFQHCSEVHRKSD
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtggcgacagtttggactacttctctggaagaactacctacagcaaaaacgt
cagatcttggtgacgttgttggagattacactgcccctaatgttttctgcgatcctgatt
gtactgcgtcagaaagtgtcctttaccaactaccccaatgcaacgcattatgatggcttt
ttactggagtggcctccacataagctgccctcaaacctgcaacttgcctacgtgcctgca
aattccagcatagtacgccagattgctgaggatgtgcagctcagcctggaacagggcttc
atcagtgctgtgcgtgggtttgagacagagcatcagtttgaggagtttgtgaagacagac
cctgaatcagcaaagatcctggccgcagtggtttttgagcactccttttctcatgatgat
gagcctctcccacttcaggtcaattatcacttgcgcttcacctatagcccccgaaatgct
cctaccaaggaaaaatcagagctgaatccgaacaatgaccttgactggcacactcttagc
ctgttccccctctttcagctgcctggccctcgggagcagcatgatctctatggaggcaca
ccaggttattaccgtgagggcttcctaatggtccagcatgctgtggaccgagccatcatg
aaggcttacaacaggactgccgcgactgccctcttcatgcagacacgggttgtgctgaca
cgcttcccttacccatctttcatctatgatgtcttcatcctggccatccagaaccagctg
cctctcttgctggtgctcagcttcacctatacgtccctcaacattgtacgagccattgtg
caagagaaggaaagaaaactcaaggaatacatgagaatgatgggcttgagcaactggttg
cactggagtgcctggttcctcatgttcttccttttccttgccatctccatcttctttgtc
accatgctctgctgtgtcagggtaagtccaaatggagcagtactgacctatagtgaccct
acacttgttttcgtcttcctccttgtgtttgctgtggctacaatcagcttctgtttcatg
ataagctccttcttctccagagctaatgttgcagcagcagcaagtggtttcctctacttc
tttagctacctgccttacctcttcctgtggccacgttatgacttgctatcccacgcacag
aaagtatctgcctgtcttatctccaatgtggccatggctatgggtgcccaacttattggc
atgtttgaaggcaaaggcacggggatccagtggcgtaatctgtttgagcctgtgactgtg
gatgatgacttctcattagctcaggttcttggactcctgctgctggatgccatactctac
agcttggtggcttggtacatggaggctgtgtttcccggcgagtatggagtgccacgacca
tggtactttttcattctgccctcatactggtgcaacagccctcgagtcaccctgttgaag
gagaaggaggaagaagaagatgcagagaaagcactgaagggagagttcatggaagaagag
ccgactggattagtctcgggcgtcaaaattaagcacctggccaaggtttttaaaatggga
aataagaccaaagaagcagtcaaggatctcacgttgaacatgtttgaaggccagatcacg
gttctgctaggacacaatggagctggaaagaccactacactgtctatgctgactggcttg
ttccctcccagcagtggccgagcttacatcaatggttatgatatatgtcaggatatggtg
ctgatccgccgcagtctaggcctctgtccacaacacgatgtgctttttgacaacctcact
gtccgagagcatctgcttttctatgcccagctaaagggctaccctcgtgagaagatccca
gatgaggttgaccgcatcatccgtatcctaaatctggaagataagagaaatgcacggtca
aagaccctttcaggcggaatgaagcgcaagctttctatcggaattgcacttattggagac
tcaaaggtagtgatgctggatgagcctacctctggcatggacccgtcagccagacgagcc
acgtgggatcttttgcagggcgagaaaaaaggtcgaactatcctccttaccacgcacttc
atggacgaagctgacctactgggagaccgcattgctatcatggctagtggggaactccag
tgctgtggctcacctctcttcctcaagaacaaatatggtgctggctaccacatggtcata
gtgaaagatgcattgtgtaatgtatcagaaatcagccgtctggtccatatgtacgtcccc
aatgccaccctggagagcagcgcaggtgctgaactttcctacatcctgccaaaagagagc
accagccggtttgagcttctgtttgctgagctggaaatgaacagagaggagttgggcatt
gcaagctatggagcatctgttaccactatggaggaagtttttcttagggtcggcaaactg
gtggactccagtctagatattcaggccattcagcttccagccctgcagtatcagcatgaa
cgcaggtcacatgactggacagttgacgatactagcagtatcagtggcatgaccgatgtg
acggacttcacagatagtggcacactgatctcagaggactgctccaacataaaactcaat
acaggggccaagctgtacttgcagcagttctatgccatgttcctaaagagggcactgtat
agctggcggaactggaaagtgatggtggcacagtttttagtgccacttattttcacagca
gttgcccttgtggtggctcaaactctccctgggcatcacaaatccccaggactcccccta
gcactcaaccggtatggccctaccactgtgccaatggctctggattccaatgccggaccc
ctggctagagcacttgctgtagcctatactgcccagcttggtgcccagagggctacacca
gtgaccaatctaactgatttctcagagtacgtcctaaacaatgccatgagggagggagga
gccttcaatgagcgctgtgtggtgggtgctgcttttcgtggacaaactagtaggtttgct
gaaatcactgggtacttcaacaaccaaggctaccataccccggctacagcactcatgctg
gtggacaatgcactgtacagactcttggctggccccaacgcttccattcacacaggaaac
aaacccatgccccgcaatatgtctgaaacagcccagagccagctctcagaggggcagact
ggttttgccatagccattaacctgatgtatggaatggcatccttagccagtacctttgct
ctgctcctggtgattgaacgctcagtgaagtccaagcacgtacagcgggtcagcggtgtc
cacctctccaacttctggttctctgcattgctctgggacctgatcaactttgcgctgcct
tgtcttctcatgctggtgatgttccgtgcatttggggtgaaggcctttgttgaggaaaat
catttggtagatgtgctgcttttgttgctgctttatggctgggctgtgattccactcatg
tacctgctcagcttcctattctctagcgctgccactgcatacacacgtctcaccatcttc
aacattgtcagcggcacagcctccttccttgccgttaccatcatgaccatccccgagttg
cagctgcagaatctttcacatttactggataaagtatttatgctattccccaactattgc
ctgggcatgtctttcagccacttctaccaaaactacgagatcatcagcttctgcaccaca
agctctttcactaaagaaatttgcaagatttgcaacatcacctatcagctgaactacttt
tctatgaatgaacctggggtgggcagctacttggtagccatgtccctccaaggtgtggtt
ttccttgtccttcttttcatcattgagctccagtgcataaacatgttcttcagcctctgc
agaagctgcaagaagggaatgctggttgcagaagaagcatttcaacctgaggacagagat
gtagctgatgagagaaagagggttttagaatgccagcctgtggtggagtccatggttggc
agtcctctcattcttcaggaacttactaaggtatatccaggaagtcagtccctgctggca
gtggatcgtttgtccctggctgtagggaaaggggaatgctttggcttgctaggttttaac
ggagctggtaagacgactacatttaaaatgctgactggagatgagactgtgactgcagga
gatgccttcatcgatggttatagcattcttcgtgaagtgaaaaaggtacaacagcgaatt
ggctactgccctcagtttgatgctgtgctagatcacatgactggccgggagacactcagc
atgtatgcgaggctcagaggaatcccagagatatatgtgtttgcatgtgtggagaatgtg
cttcgttcactgcttttggagccacatgctgacaaactggtccgcagttacagtggcggc
aacaagaggaagctgagtgcaggtatggctctgattggtgggccaccagtcatcttcttg
gatgagccatccactggcatggatcctgtggccagacgtttgctctgggacgcagtcaca
cggactagagaatctggcaaagccattgtcatcacctcacacagtatggaggagtgcgag
gctttgtgcaccagactggctgtgatggtcaatggacagttcaagtgtctgggcagccca
cagcatctaaaaagcaaatttggcagtggatacacactgttggccaaaatccgcatgggg
gcagatttagaggagatggaacttcagctgtttaaagacttcatcgagagcacctttcct
ggtagcttactaaaggatgaacaccagggaatggttcattatcatttgactgacaaagca
ttgacctgggctcaggtttttgggacccttgaggcagctaaggagaaatatagcattgaa
gactattgtgtgagtcaaatctcactggaacaagtttttctgagctttgctcaattccag
cactgttcagaagtgcatcgaaaatcagactaa
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integrated database retrieval system
