Silurus meridionalis (southern catfish): 124396406
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Entry
124396406 CDS
T08004
Symbol
cpt1a2b
Name
(RefSeq) carnitine O-palmitoyltransferase 1, liver isoform
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00071
Fatty acid degradation
smeo01212
Fatty acid metabolism
smeo03320
PPAR signaling pathway
smeo04148
Efferocytosis
smeo04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
124396406 (cpt1a2b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124396406 (cpt1a2b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
124396406 (cpt1a2b)
03320 PPAR signaling pathway
124396406 (cpt1a2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124396406 (cpt1a2b)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
124396406 (cpt1a2b)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
124396406 (cpt1a2b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
Motif
Other DBs
NCBI-GeneID:
124396406
NCBI-ProteinID:
XP_046721481
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Position
14:complement(36517..69252)
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AA seq
714 aa
AA seq
DB search
MAEAHQAVAFQFTITPEGFDLQLSRQALNQIYISGLRSWKKRISRLKNGVLKGVYPASPS
SWLFVAVVTLATLYAETDPSMGLISKIRDHLPLSVSLSSHGQTMLSALLFSTLLWLSLVL
TLRFCLKLLLSYHRWMFERHGHISTTTKLWVSLVKLLSSRKPLLYSYQSSLPHLPVPSIR
DTLHRYLESVRPLLSPDEFDHMTQLAAEFEKNLGKRLQTYLKLKALWATNYVSDWWEEYV
YLRGRNPIMVNSNYYGMDFLYVTPTAKQAARAGNTITALLLYRRKVNREELNPSRVPGTV
VPLCAAQCERMFNTTRTPGEETDTLQHWQDSEFVAVYHRGRYFRLWVYSAGRLLSPREIQ
HQIQKILDDPTLPAPGEETLGALTAGNRVPWARVRKQYFSSGINKRSLDCIEKAAFFVTL
DDEEEGMKGDDPDGSLDRYAKSLLHGKCYDRWFDKSLCVVVYKNAKTGLNAEHSWADAPT
VAHMWEFTLATDAFHLGYDTDGNCRGEVQRSLPPPQRLGWDIPQKVKEQIKESLAVARTL
ADDVDCHVFPFREFGKGRIKKLKLSPDAFIQISLQLAYYRDRGGFCLTYEASMTRLFREG
RTETVRSCSNESCAFVLALEAGEERERCISLLHKAAEKHQNLYKLAMTGSGIDRHLFCLY
VVSKYLGVKSPFLNQVLSEPWRLSTSQTPVQQMELFDLINYPEFISLGGGLPSS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcccaccaggctgttgcattccagttcacgatcactcctgagggctttgac
ctgcagctctctcgacaggctctcaatcagatctacatctccggcttacgttcatggaag
aaacgcatcagcagactgaagaatggtgttctaaagggcgtataccctgcaagcccctcc
tcttggctctttgttgccgtggtaactctggccacactgtatgctgagaccgacccctcc
atgggccttatctccaagatccgggatcatctgccactcagcgtgtctctgagctctcac
ggacagaccatgttgtcagcgttgttattcagcacactgttgtggctttcactcgtcctc
accctgcgcttctgtctcaaactcctcctatcctaccatcgctggatgttcgagcggcac
ggacacatctccaccaccaccaagctttgggtgtctctggtgaagttactctccagcagg
aagccgttgttgtacagttatcagagttcgttgccgcacctgcctgttccttccatcaga
gacacactgcatagatatctggagtctgtgcgtcctctcctaagcccagatgaatttgat
cacatgacacaactggctgctgagtttgagaagaatttgggaaagcgtcttcagacttac
ctgaaactcaaagctttgtgggccactaattacgtgagtgattggtgggaggagtatgtt
tacctgcgagggcggaaccccatcatggtcaacagtaactactatggaatggacttcttg
tatgtaacaccgacagctaaacaggccgctcgagcaggaaacaccatcacagccctgtta
ctgtaccgccgtaaagtcaaccgagaggagctaaatcctagccgtgttcctgggacagtc
gtccctctgtgtgcagcacaatgtgagcgcatgtttaacaccacacgcactccaggagag
gagacggacacactgcagcactggcaggacagtgagtttgtggctgtgtaccacaggggg
cgctatttcaggctgtgggtttactcagctggccgtctcctctctccccgagagatccaa
caccagatccagaaaattctggatgatcccacacttcctgccccaggagaggagacactg
ggagcactgaccgctggaaacagggttccctgggcacgtgtgaggaagcagtatttcagc
tcggggataaataaacgttctctggattgcattgagaaagcagcgttctttgtcactctg
gatgatgaagaggaggggatgaagggcgacgatccggatgggagcctggaccgctacgct
aaatctctcctccatggcaaatgttatgatcggtggtttgataaatccctgtgtgtggtg
gtttataaaaacgcaaagaccggcctcaacgcagaacactcctgggccgacgcccctact
gtcgctcacatgtgggagttcactttggccacagatgcttttcacttgggttatgacaca
gatggaaactgtcgaggcgaagtgcagcgctctctccctcctcctcaacgcctaggctgg
gacataccacaaaaggtgaaggagcagataaaggagtctctggctgtggctcgtacgttg
gctgatgatgtcgactgtcatgtgtttcccttcagagagttcggaaaaggtcgcattaaa
aagctgaaacttagcccagatgcttttatacagatatcactgcagctggcatactatagg
gacagaggaggtttttgcttgacttatgaggcctctatgacacgtttattcagagagggt
cgcacagagactgttcgctcctgcagtaacgagagctgtgcttttgttctggctctggag
gctggagaggagagggaacgctgcatctctctactgcataaagctgctgagaaacatcag
aacctctacaaattggccatgacgggttccggcatcgacagacatctcttctgcctctac
gtggtctccaaataccttggagtgaagtctccattcctcaatcaggtgttgtctgaaccc
tggcggctctccacctctcagactcctgttcagcaaatggagctttttgacctcattaat
tatcctgaattcatctcactgggtggtggcttgcccagtagctga
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