Silurus meridionalis (southern catfish): 124396413
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Entry
124396413 CDS
T08004
Symbol
esr2b
Name
(RefSeq) estrogen receptor 2b isoform X1
KO
K08551
estrogen receptor beta
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
124396413 (esr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124396413 (esr2b)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
smeo03310
]
124396413 (esr2b)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
124396413 (esr2b)
Nuclear receptors [BR:
smeo03310
]
3. Estrogen like
3A. Estrogen receptor
124396413 (esr2b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
ERbeta_N
Motif
Other DBs
NCBI-GeneID:
124396413
NCBI-ProteinID:
XP_046721495
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Position
2:28264395..28320784
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AA seq
568 aa
AA seq
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MDQEAASPLFPSLFPTSVGVDRGTVCIPSPYADNSNAEISFYGPSVSENSSTAPQLSPSL
FWPTHNTCTMPALSLQCPHALPFTEPQIHTAWVDTKPHTTGRNSSFMSHSKLFRRRPEDD
EEPLNSSSLSSGAMAKSDMHFCVVCQDYASGYHYGVWSCEGCKAFFKRSIQGHNDYICPA
TNQCTIDKNRRKSCQACRLRKCYEVGMMKCGARRERCGYRGSRHRRTIQIRDGSARIVGV
RGHAQRHPNTPLHLSLSLPDSRVPAESGFSGLSPEQLVHCILEAEPPEIYLRQQMNKPYT
QSTVMMSLTQLADKELVLMISWAKKIPGFMELSLAHQVHLLECCWLEVLMLGLMWRSIDQ
PGKLIFTPDLKLSRDEGSCVEGIMEIFDMLLAGSSRFRELKLQKEEYVCLKALILLNSSM
YMTSSECEMELESRTKLLRLLDAVTDALVWAISRTGLSMQQQSARLAHLLMLLSHIRHLS
NKGMEHLSRMKRKNVVLLYDLLLEMLDANTAHNRRGAHANTTPRETALNLNADPAVMTPV
TSPNTPTPAQLPSPVHQHAQVKLQCGQE
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggaggcagcatctccactttttccttctctattccctacgtctgtaggagtg
gacagaggaactgtttgtatcccttctccatatgcagataacagcaacgccgagatatct
ttttatggtccgtctgtgtctgagaactcctccacggcacctcaactcagcccgtcactc
ttctggcccacgcacaacacttgtaccatgcctgctctatccctgcagtgcccacatgca
ctgccattcaccgagccacagatacacaccgcctgggtcgacaccaagccacacaccacc
ggtcgaaacagctccttcatgtctcattcaaagttgtttaggaggagaccggaagacgac
gaggaacctctaaactcctcttccttgtcatcgggtgccatggccaagagcgacatgcac
ttctgtgttgtgtgtcaagactatgcgtcaggctaccactatggcgtctggtcctgtgag
ggctgcaaagctttctttaagaggagcattcaaggacacaatgactacatctgtccagcc
accaaccagtgcacgattgacaagaatcgtcgcaagagctgccaagcctgccgtctacgc
aagtgctacgaagtgggaatgatgaagtgcggtgcacgacgtgagcgttgtggttatcga
ggctcccgccatcgccggaccatccagatcagagatggctcagccaggattgtgggggtc
agaggtcatgcccagagacatcctaacaccccgcttcatctctcgctttccctcccggat
tccagagtgccagctgagagtggattttccggtttgtcccctgagcagctggtgcactgc
atcttagaggcagagccaccagagatctacctgaggcagcagatgaacaaaccatacacg
cagagcactgtgatgatgtcactcacacagctcgctgacaaggagctcgtactcatgatc
agctgggccaagaaaattccaggtttcatggagctgagcctggcccatcaggtgcatttg
ttagaatgttgctggttggaggtgctcatgctaggcctgatgtggaggtcaattgatcag
ccgggaaaactcatcttcaccccggacctcaaactcagcagggatgagggaagctgtgtt
gaggggatcatggagatttttgacatgcttctggccggctcctccaggttcagagagctg
aagctgcagaaggaggagtatgtctgcctcaaagcgctcatcctgctcaactctagtatg
tacatgacatcgtcagagtgtgagatggagctggagagcaggaccaagttgctgcggctg
cttgatgccgtgacggacgcgctggtgtgggccatctcacgaacaggtttatccatgcaa
cagcagtccgctcgtctcgctcaccttctcatgttgctctcacatatacgacatctcagt
aacaaagggatggagcatctttccaggatgaagcggaagaacgtcgtcctgctgtatgac
ctgctgctggagatgctcgacgcaaacacggctcacaataggcgtggtgcacacgctaac
actaccccccgagaaactgcgctgaacttaaacgctgaccctgcggtcatgacgccagtg
acctcaccaaacacacctacgcccgctcagctccccagtcccgtccatcaacatgcacag
gtgaagttgcagtgtggccaggagtga
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