Silurus meridionalis (southern catfish): 124396654
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Entry
124396654 CDS
T08004
Symbol
smurf2
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04120
Ubiquitin mediated proteolysis
smeo04137
Mitophagy - animal
smeo04144
Endocytosis
smeo04340
Hedgehog signaling pathway
smeo04350
TGF-beta signaling pathway
smeo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124396654 (smurf2)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124396654 (smurf2)
04350 TGF-beta signaling pathway
124396654 (smurf2)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124396654 (smurf2)
04137 Mitophagy - animal
124396654 (smurf2)
09144 Cellular community - eukaryotes
04520 Adherens junction
124396654 (smurf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124396654 (smurf2)
04121 Ubiquitin system [BR:
smeo04121
]
124396654 (smurf2)
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124396654 (smurf2)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124396654 (smurf2)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
124396654 (smurf2)
Autophagy
Mitophagy
Other mitophagy associated proteins
124396654 (smurf2)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
HECT type E3
124396654 (smurf2)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
124396654 (smurf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
124396654
NCBI-ProteinID:
XP_046721781
LinkDB
All DBs
Position
14:12707672..12745254
Genome browser
AA seq
764 aa
AA seq
DB search
MSNQGGRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKLDSITISVWNHKKIHKKQGAGFLGCVRLLSNSINRLKDTGYQRLDLNKL
GPNDSDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RSTQWERPTRPASEYSSPGRPLSCLVDENTPIMTPNGAAVAQAGELRVQERRVRSQRHRN
YMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELGPLP
PGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPNGSRSAGETPNSRVGQLK
EQAQSVLSPGNLPDDAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIEVSREEIFE
ESYRQVMKMRPKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDI
YTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLDDMES
VDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIAVTQDTKKEYVRL
YVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKIDVNDWKSNTRLK
HCTPDSNIVKWFWRAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQID
ANTDNLPKAHTCFNRIDIPPYEHYDKLYDKLLTAIEETCGFAVE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcaagggggaaggagaaatggacccgtgaagctgcgattaacagtgctctgt
gcgaagaatctagcgaagaaagacttctttcgcctgcctgacccttttgccaaagtggtg
gtggatggttcagggcagtgtcactccacagacactgtgagaaacactcttgaccccaaa
tggaaccaacactatgacttatacatcgggaagttggactccatcactattagcgtgtgg
aaccataagaaaattcacaaaaagcagggcgctggctttctgggctgtgtacggctcctc
tccaactctatcaaccgtctcaaagatacaggctatcagagattggatctaaacaagctg
ggacccaatgacagtgatacagtgaggggtcagatagtagtgagtcttcaatctcgagac
aggattggcactggtgggcctgtggtggactgcagccgactttttgacaatgatctacct
gatggctgggaggaaaggagaacagcatctggtcgaattcagtacctgaaccatatcaca
cgcagcacgcagtgggagagaccaaccaggccggcgtcagaatactcaagtcccggtcgt
cctcttagttgtttggtcgatgaaaacacacccattatgacacccaatggggcagcggtt
gctcaggcaggcgagctgcgagtgcaggagcggcgtgtgcggtcacagcggcatcgaaat
tacatgagccgtactcacctgcacacaccaccagatcttccagagggctacgagcagcgg
accacacagcagggccaggtgtacttcctgcacactcagacgggcgtcagcacgtggcat
gaccccagagtgccgagggatcttagtaatgtgaattgtgaggagctgggtccactgcct
ccaggttgggagattcggaacacagctacgggccgtgtttactttgttgaccacaacaac
agaacgacacaatttacggacccacggctctctgccaaccttcaccttgtcctcaatccc
agtcctaatggttcacgaagcgctggtgagactccaaacagtcgtgtgggtcagctgaaa
gagcaggcccagtcggtgctgtctcccgggaatctgccagatgatgccgagtgtcttact
gtgcccaagtacaaaagagacctggtgcagaagctgaagatcctccggcaggagctttcc
cagcagcagccacaggcagggcactgccgcattgaggtgtcccgtgaggagattttcgag
gagtcatatagacaggtaatgaagatgaggccaaaagacctttggaaaagactaatggtg
aagttcagaggagaagaaggactggattacggaggcgtagcaagagagtggttatacctt
ctgtctcatgagatgttgaacccatactatggacttttccagtattcacgtgatgacatc
tacacgctacagatcaacccagattctgctgttaatccggaacacttgtcctattttcac
tttgtgggccgcataatgggtatggccgtgttccacgggcactacatcgatggcggcttc
actctacccttctataagcagctgcttggcaaacccatcactctggatgatatggagtct
gtggatcctgatctccacaatagtcttgtctggatccttgacaacgacatcacaggggtt
ttagaccacacattctgtgttgaacacaatgcatatggcgagatcattcagcatgagctg
aaacccaatggcaagagcattgcggtcactcaggacaccaagaaggaatacgtcaggctt
tatgtgaactggcgcttcctgagaggcatcgaggctcagtttttagccctgcaaaaaggc
tttaatgaggtcataccgcaacatctgctcaaagccttcgacgaaaaagagctagagctt
atcgtctgtggcctgggtaagattgatgttaatgactggaagtccaacacacggttgaag
cactgcacccctgacagcaacattgtgaagtggttctggcgtgctgttgagtcatttgat
gaggagcgcagagctcgactattgcagtttgtcacgggttcatctagagtcccactgcag
ggtttcaaagccctacaaggagctgccggtccacgcttgttcaccatccatcagattgat
gccaacaccgataacctgcctaaagctcacacatgctttaaccgcattgacattcctcca
tatgagcactatgacaagctctatgacaaactcctgacagccatagaggagacctgcggc
tttgctgtcgagtga
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