Silurus meridionalis (southern catfish): 124396758
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Entry
124396758 CDS
T08004
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
124396758 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124396758 (srebf1)
04131 Membrane trafficking [BR:
smeo04131
]
124396758 (srebf1)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
124396758 (srebf1)
Membrane trafficking [BR:
smeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
124396758 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
124396758 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
ZapB
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
124396758
NCBI-ProteinID:
XP_046721990
LinkDB
All DBs
Position
14:complement(10694034..10711591)
Genome browser
AA seq
1124 aa
AA seq
DB search
MNHLSFDDPSLDSLDPSLSLSDPSDIDTALLNDIDDMLQLIHTQEMEFNLFDHTSFPPPP
PPAPTHDLSALAPSSLAPTPRSSSITSSTSSILTNSPHLDALLGPPVSRNSSTPDKSFQA
PNFQQTPSTQVTSTPVTPSQVKQPNTQTAQPVLHLPSQAPQSPTFSASPQQPGPNYASQN
GYTVITKQGSTQPMPSVASSPPSVQPVAIQAQVQSLSTSSILTTSSSPPTQTHVQQVPVL
LQPQFIKAESLLLTTLKPDMSMVTTVASPCITSLATSTASMQGTSLQALMSGGTILTTVP
VMVDTEKLPINRIAISGKPGMQVQKGEKRTAHNAIEKRYRSSINDKILELKDLVAGTEAK
LNKSAVLRKAIDYIRHLQQSNQKLKQENMALKMANQKNKSLKDLVAMEVDVKTELPTPPA
SDAGSPEPSGSFSHCSSDSEPDSPMVEESKPMSSAEKTAGGMLDRSRMALCAFTLLFLSF
NPLASLVCGSQSRAEEPVLPGHSGTGRTMLGFDNAADSWGWMDWMLPTLLVWLLNGVLVA
GVLVKLLVYGEPITRPHSESSVLFWRHRKQADLDLARGDFAQASQNLWTCLKALGRPLPT
SQLDLACAVLWSTLRLWLQRLWVGRWLACRAGALRADRPLQEDARKSSRDAALVYHRLHQ
LHMTGKLGGSHLFAVHMALSAVNLAECAGDCLSVATLAEIYVSAALRVKTSLPRLLHITS
RGFLSRARQACLSPSGSVPPTMQWLCHPLGHRFFVDGDWSVRSTPKESIYSQAGNTVDPL
AQVTQAFREHLLEKALYCVAQPRGDKSPNEGQGEYSDALEYLQLLNSASDAAGATTQAFA
IGSNMAAIAGCDPHSKWWSSVAVVIINWLQGDDVAAERLYPAVEHLPRSLQSDESPLPKA
CLNMFKAVRALLAKPENRQLSLSYCEKASSLFRDSLKLGPHCSSSTLDKLVQLLLCDLLL
VTRTSLWREQQICSPASPQQSPASAASPAELQGFQQDLSSLRKLAHSFRPAMRRLFLHEA
TARLMAGASPTRTHQLLDRSLRRRATPGGKIEECETRPGQREQAEAAMLACWYLPPSFLS
APGQRVGMLADAARTLEKLGDKRTLHDCQQMIIKLGSGTTVAST
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatttgtcgtttgacgatccgtcactggatagcttggatccaagtttatccctc
agtgatccaagtgatattgacacagctttgctcaacgacattgacgacatgctgcagctc
atccacacccaagagatggagttcaacttgtttgatcacacctcctttccaccacctcca
ccaccagctccaacgcatgatctttcagcgctggctccttccagcttggctcccactcct
cgcagttcctccatcacctcctccacctcatccatcctgaccaacagcccacatctggat
gccctgctgggtcccccagtcagccgcaactcttccaccccagacaagtctttccaagcc
ccaaactttcagcaaactccctcgacccaggtgacctctacacctgtgaccccaagccaa
gtaaagcagcccaatactcaaacagctcaacctgtgcttcatctgccaagccaggctcct
caaagccctacgttctccgcaagcccccagcaacctgggcccaactacgcaagccagaat
ggatacactgtaatcactaagcagggctctacccagcccatgcccagtgttgccagctct
ccaccaagtgttcagccagtagccatccaggctcaggtccagagtctttccacatcttcc
atcctcacaacctcctccagtcctccaacacagactcatgttcagcaagtccctgtcttg
ttgcagcctcagttcatcaaggcagaatctctcctcctcaccaccctgaagccggacatg
tccatggtgactacagtagcctctccgtgcatcacctctctggctacttccacggcttca
atgcagggcacctcactgcaggctctgatgagcggcgggactatcctgaccacggtgcca
gttatggtagacacagagaagctgcccattaaccgtatagccatcagtggcaagccaggt
atgcaggtccaaaagggcgagaagcgcacagcacacaacgcaatcgaaaagcgataccgc
tcctccatcaacgacaagatcctcgaactcaaagacctggtggccggcacagaggctaag
ctgaataaatctgccgtgttgaggaaagccattgactatatccgccacctgcagcagtcc
aaccagaaactaaagcaggagaacatggctctcaaaatggccaaccaaaagaacaaatct
ctaaaagacctggttgccatggaggtggacgtgaagaccgaacttcctactcctccagcc
tcggacgccggctcacccgaacccagtggctccttttcccactgcagcagcgactcggag
cctgacagtcccatggtagaggaaagcaagcccatgtccagtgcagagaagactgctgga
gggatgctggaccgctcacggatggctctgtgtgccttcaccctccttttcctttctttc
aacccgctggcatctctggtgtgtgggagccaaagtagagctgaagagcctgttcttcca
ggccactcaggaactggcaggaccatgcttggatttgataatgcagctgattcgtggggc
tggatggactggatgctgcccactcttttggtgtggcttcttaatggtgttctggtagct
ggagttttggtcaagctgttggtgtatggagagcccatcactagaccacactctgaatcc
tctgtccttttttggagacaccgcaaacaggctgaccttgacctggccagaggagatttt
gcccaggcctctcagaacctctggacatgtctgaaggcccttggtcgtcctctgcccacc
tctcagctggacttggcgtgtgctgtgctctggtctaccctgcgtctgtggctgcagaga
ctttgggtgggtcgctggctggcctgcagggctggagctctgcgtgcagatcgcccccta
caggaggatgcacgcaagagcagccgtgatgctgctctcgtttatcaccgcctgcatcag
ctgcacatgaccggaaagctgggtggcagccacttgttcgcagtgcacatggcactgagt
gcggtgaatctagccgagtgtgctggagactgtctgtctgttgccacgttggccgagatc
tatgtctctgctgccctgagagtcaaaaccagtttgccccgtctgctgcacattacctct
cgtggctttctaagtcgagctcgacaggcctgtctgtcccccagtggcagtgttcctcct
accatgcagtggctatgccaccctctgggtcatcgcttctttgtggatggcgattggtct
gtacgcagcacccctaaagagagcatctatagccaggctggaaacacagtggatcctctg
gctcaggtgactcaagcttttagggagcacctgctggagaaggctctgtactgcgtcgct
cagcctcgtggagacaaaagccccaacgagggacaaggtgagtactccgatgctctggag
tacctgcagctgctaaacagcgcctccgatgccgcaggtgctaccacacaggcctttgct
attggctccaacatggccgccatcgccggctgtgaccctcactcaaaatggtggtcatca
gttgccgtggtgattattaactggctgcagggagatgatgtagcggcagagaggctgtat
ccagctgtggaacatcttccacgcagtcttcagtcagacgaaagtccactaccaaaagcc
tgtttgaacatgtttaaagcagtgcgtgccctgctggccaaaccagagaacagacagcta
agcttgagctactgtgagaaagcaagcagcctgttcagagacagcctcaaactggggcca
cactgcagcagcagcaccttagacaagttggtgcagttgttactgtgcgacctgctgctg
gtgacacgcaccagtctgtggcgagagcagcaaatatgttctcccgcttccccacagcag
agcccggcttcagccgcttctcctgccgagctacagggcttccagcaggacctgagctct
ttgcgcaaacttgcccacagcttccgaccagccatgcgcaggttgtttctgcatgaagct
actgccaggctaatggcaggagcaagtccaacgcgcacacaccagctcctggaccgcagt
ctgcgccgccgtgccacacctggaggcaaaatcgaggagtgtgagacacggccaggccag
cgtgagcaggcggaggcggccatgttggcatgttggtatttgcctccatcgttcctgtcg
gccccgggccagagagtggggatgttggcagatgcagcacgtactctcgagaagctcggg
gacaaacgcacgctccacgactgccagcagatgatcatcaaattgggcagtgggaccaca
gtcgcctccacttag
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