Silurus meridionalis (southern catfish): 124396764
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Entry
124396764 CDS
T08004
Symbol
gtpbp1
Name
(RefSeq) GTP-binding protein 1 isoform X1
KO
K24887
GTP-binding protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124396764 (gtpbp1)
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124396764 (gtpbp1)
03012 Translation factors [BR:
smeo03012
]
124396764 (gtpbp1)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
124396764 (gtpbp1)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
124396764 (gtpbp1)
Translation factors [BR:
smeo03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
124396764 (gtpbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP-eEF1A_C
GTP_EFTU_D3
MMR_HSR1
Dynamin_N
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
124396764
NCBI-ProteinID:
XP_046722001
LinkDB
All DBs
Position
14:23723126..23741302
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AA seq
667 aa
AA seq
DB search
MASTAAPEPGSSPGSVSATESLVPASMFAPAGRGCGEDAGAECFEDGEALNGESGDFSSK
SALVSPNGEQYDSLLRQLRERMDEGCGETIYVVGVGSDGGDYGLNASDMEASVATVQSLC
EQIEADLILLRERAESGGQVRDYLIRRRVGEADFLEVRVAVVGNVDAGKSTLLGVLTHGE
LDNGRGFARQKLFRHKHELESGRTSSVGNDILGFDRQGHVVNKPDSHGGSLDWTKICEKS
SKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPVF
VVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQNKDDVIVTASNFSSERMCPIFQ
ISNVTGENMDLLKMFLNLLSSRTSFKDDEPAEFQIDDTYSVPGVGTVVSGTTLRGLIRLN
DTMLLGPDPIGAFIPIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRL
NPQASWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILTMNRDCLRTGDKATVHFRF
IKTPEYLHADQRLVFREGRTKAVGTITKLLQSTNNQPSNSKPPQIKMQSTKKLVKRDEGQ
IPAGEETLSNTAPSTSISPLQQTEGEEDTQIKDSKPKSGGRRRGGQRHKGKSQSSSTAPP
AGAVGGC
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacggcggctcctgagcccgggtcgagtccagggtcggtgtccgccacggag
tctttggtgcctgctagcatgttcgctcctgccggccggggctgtggagaagacgccggg
gcggagtgcttcgaggacggggaggcgctgaacggagagtccggggatttctccagtaag
tcggctctggtcagtcctaacggagagcagtacgactcgttgctgcggcagctgcgtgag
cggatggacgagggttgtggagagactatttacgtggtgggagtggggtcagacggtggt
gattacggtctgaatgcgagcgacatggaggcgtcggtggccacggtgcagtccctgtgt
gagcagatcgaagccgacctcatcctcctcagagagcgcgccgagagcggtggccaggtc
cgagactacctgatccgccgccgtgtgggcgaggcagacttcctggaggtcagggtggct
gtggtagggaatgtggatgcagggaagagcacactcctgggagtcctcacacacggagag
ctggataacggtcgaggtttcgctcgtcagaaacttttccgtcacaagcacgagctggaa
agcggccgcaccagcagcgtggggaacgacatcctgggcttcgaccgccaaggccacgtc
gtcaacaaacccgacagccacgggggcagtctggactggaccaagatctgtgagaagtcc
tccaaggtcatcaccttcatcgacttggcaggacacgagaagtacctaaagaccaccgtg
tttggcatgactggccacctgcctgacttctgcatgctcatggtgggcagtaacgcaggt
atagtgggcatgactaaagaacacctgggcttagcactggctctcaatgtgcccgtgttt
gtggtggtcacaaagatagacatgtgtcctgctaacatcctgcaagagaccctgaagctg
ctgcagaggttgctgaagtctcccggctgcaggaaaatcccagtgctggtgcagaataaa
gacgacgtcatagtcactgcttccaacttcagctctgagagaatgtgcccaatatttcag
atctctaatgtcactggggagaacatggacctattgaagatgttcctgaacctgctgtcc
tccagaacatcgtttaaagatgatgagccagctgagtttcagatagatgacacctattca
gtaccaggtgtagggactgtagtatcaggaacaacactacgggggttaatccggctgaat
gacaccatgctgctggggccggaccccatcggtgccttcatccccattgctgttaaatca
atccacaggaagcggatgcctgtgaaggaggtgcgaggaggacagaccgcatccttcgcc
ctcaaaaagatcaaacgctcatctataaggaaagggatggtgatggtgtcaccacggcta
aacccacaggcatcatgggagtttgaggcagagatcctggttctccatcaccccaccaca
atctctccacgataccaggccatggtgcattgtgggagcatcagacagacggcgacgatc
ctgacgatgaaccgagactgtttacgaacaggagacaaggccacggtgcacttccgcttc
atcaaaacccccgagtacctgcacgcggatcagagactggtgttcagagagggcaggacc
aaagctgtgggcaccatcaccaagcttctccaatcgacaaataatcagccttcaaactcc
aaacctccacagatcaaaatgcagtccaccaaaaagctcgtgaagagagacgagggccag
atacctgcaggagaggagacgctgagcaacacagcaccgagcacctccatcagtccactg
cagcagactgagggagaggaagacactcagattaaagactcgaagccaaagtctggaggc
aggagacgaggcggacagagacacaaagggaaaagtcaatccagctccacggcgcctcct
gctggtgcagtcggaggttgttaa
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