Silurus meridionalis (southern catfish): 124396794
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Entry
124396794 CDS
T08004
Symbol
itgb3a
Name
(RefSeq) integrin beta-3a
KO
K06493
integrin beta 3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03266
Virion - Herpesvirus
smeo04081
Hormone signaling
smeo04145
Phagosome
smeo04148
Efferocytosis
smeo04510
Focal adhesion
smeo04512
ECM-receptor interaction
smeo04810
Regulation of actin cytoskeleton
smeo04820
Cytoskeleton in muscle cells
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
124396794 (itgb3a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
124396794 (itgb3a)
04512 ECM-receptor interaction
124396794 (itgb3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124396794 (itgb3a)
04148 Efferocytosis
124396794 (itgb3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
124396794 (itgb3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
124396794 (itgb3a)
04810 Regulation of actin cytoskeleton
124396794 (itgb3a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124396794 (itgb3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124396794 (itgb3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124396794 (itgb3a)
04515 Cell adhesion molecules [BR:
smeo04515
]
124396794 (itgb3a)
04090 CD molecules [BR:
smeo04090
]
124396794 (itgb3a)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
124396794 (itgb3a)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124396794 (itgb3a)
Cell adhesion molecules [BR:
smeo04515
]
Integrins
Integrin beta subunits
124396794 (itgb3a)
CD molecules [BR:
smeo04090
]
Proteins
124396794 (itgb3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
124396794
NCBI-ProteinID:
XP_046722054
LinkDB
All DBs
Position
14:7806510..7826454
Genome browser
AA seq
785 aa
AA seq
DB search
MGRFLPHIWTVLTVLTVVSTVSGSNICTSRGVGTCKECLTIHPSCAWCSQKDMGDGGSTA
SRCNLKSILLQSGCKAEFIEFPVSSKVVEEDRPLSVQGSTGDITQIQPQRIRLTLRPDDS
KFFTVTVRQVADYPVDLYYLMDLSYSMKDDLNSLRSLGSDLAKAMGSMTSNLRMGFGAFV
DKTLAPYMYMFPDEAIRNPCLGISTTCSPQFGYKNVLSLTDQVNRFTEEVIKQQVSRNRD
SPEGGFDAILQAVVCKDKIGWRPGASHLLVFTTDATSHIALDGKFAGLVHPNDGNCYINN
NIYDKTSILDYPSIGMLTDKLSENNINLIFAVTENVIPLYLNYSKLIPGTTVGKLSYDSK
NVIQLILDAYANIRSKAELEVLGVPNELSLSFNATCLNGELVPGVRSCSGLKIGDTVSFS
VEAKLHSCPNVKSQTFIIKPLGFKDSLQVTVDFACNCSCQDTSQPASPACHNGNGTLECG
VCLCDPGRLGPQCECTEADYKPTDTDSCKPAPGAPICNGRGDCLCSQCSCHSRDFGKVWG
KYCECDDFSCIRSNGQLCSGHGDCVCGFCQCNLGWTGESCNCSSRIDNCMAGIGLLCSGR
GECLCGTCACTVPGAYGSTCEKCPTCPDSCTLKKDCVECKHYKRGPLFEKKTCNTAMCRE
EIQLVDELAFHEKSSVNCSYKDEDDCIHHFQYYEDINGKSILYLVKEPECPKGPDILVVV
ASVVGSIFLLGLAALLVWKLLITVHDRREFAKFEEERAKAKWEAANNPLYKGATTTFTNV
TYQGN
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggggaggtttttgcctcatatttggacagtactgactgttcttacagtggtttctaca
gtttcaggttcaaacatatgtacctcaagaggtgtcggaacctgcaaagaatgtttgacc
attcatccgtcttgcgcttggtgttctcagaaagacatgggtgacggtggctccactgct
tcccgatgtaacctaaagtccatcctgctccagtctggatgtaaagcagagtttattgag
tttcctgtcagtagcaaagtagtggaagaggaccgccccctcagtgttcaaggttcgact
ggtgacatcacccagattcaaccacagcgtatccggctaaccttgcggccagatgactcg
aagttttttacggtgaccgttcgtcaggtggctgattatcctgtagacctttactacctg
atggatttgtcctattctatgaaagacgacttaaacagcctccgctcccttggcagtgac
ctagctaaagctatggggagtatgaccagtaacctgcgcatggggtttggggcatttgtc
gacaaaacactcgccccttacatgtacatgtttccagacgaggccataagaaacccctgc
cttggaatttccaccacctgctcgcctcaatttggttataagaacgtcctgtcattgaca
gaccaggtgaatcgtttcacagaggaagtgatcaagcagcaagtatcacggaatagagac
tcaccagaaggaggatttgatgccatactgcaagctgttgtctgcaaggataaaattggg
tggcggcctggtgcatcccacctgctggtatttactacagacgctacaagtcacatcgca
ctagatggcaaatttgctggtcttgtccatcccaatgatggaaattgttacattaataac
aacatctatgataagacttctatactggactatccctctattggaatgctcactgacaaa
ctgagtgagaataatatcaacctcatctttgcagtaacagagaatgtgatacctctgtat
cttaattacagtaagctgattcctggtaccactgtagggaaactgtcttacgactctaaa
aatgttatccagctcatcctggatgcgtatgcgaatatcaggtcaaaggcagagctggag
gtgttgggtgttcccaatgagctaagtttgtcgtttaatgccacatgtctcaatggagaa
ttggtacctggcgttagatcctgctcaggacttaaaattggtgatacggtgtccttcagt
gtagaagcaaagctccatagctgtcctaacgtgaagagtcaaaccttcattatcaagcct
ctgggatttaaagattcactgcaggtgactgtcgattttgcatgcaactgctcctgccaa
gacacttcccagcctgctagccctgcctgtcataatggaaatggcacactggagtgtggt
gtttgtctgtgtgacccaggacgcctgggaccacagtgtgagtgcactgaggctgattat
aagcccactgacacggacagctgtaaacctgcccctggtgcacctatctgcaatggacga
ggcgattgtttgtgcagccagtgtagctgtcactcaagagactttgggaaggtatggggc
aaatactgcgagtgtgatgacttcagctgcatccgctccaatggtcaactttgctctggc
catggggattgtgtatgcgggttctgtcagtgcaatcttggctggacaggcgagagctgt
aactgctcctcaaggattgacaactgcatggccggcattggactgctgtgtagcggtcgt
ggtgagtgtttgtgcggtacatgtgcatgcactgtgcctggagcctacggttccacctgt
gagaaatgtcccacctgccctgattcctgcactttaaaaaaggattgtgtggagtgcaag
cactataagagaggaccgctctttgagaagaaaacgtgcaacactgcaatgtgcagagaa
gaaattcaactggtggatgagctagccttccatgagaagagctcagtgaactgcagctac
aaagatgaggatgattgcattcaccacttccaatactatgaagacatcaacggaaaatcc
atcctctatctcgttaaagaacccgagtgtccaaaaggtcctgatatcctggtagtggtg
gcttctgttgtcggctctatttttttgctgggcttggctgctctgctggtgtggaagctg
ctgatcactgttcatgaccgccgagagtttgctaagtttgaggaagagagagccaaggcc
aagtgggaagcggctaataacccattgtataaaggagctacaactacatttacaaatgtg
acctaccagggcaactaa
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