Silurus meridionalis (southern catfish): 124396799
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Entry
124396799 CDS
T08004
Symbol
itga3a
Name
(RefSeq) integrin alpha-3 isoform X1
KO
K06482
integrin alpha 3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04510
Focal adhesion
smeo04512
ECM-receptor interaction
smeo04810
Regulation of actin cytoskeleton
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124396799 (itga3a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124396799 (itga3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
124396799 (itga3a)
04810 Regulation of actin cytoskeleton
124396799 (itga3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124396799 (itga3a)
04515 Cell adhesion molecules [BR:
smeo04515
]
124396799 (itga3a)
04090 CD molecules [BR:
smeo04090
]
124396799 (itga3a)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124396799 (itga3a)
Cell adhesion molecules [BR:
smeo04515
]
Integrins
Integrin alpha subunits
124396799 (itga3a)
CD molecules [BR:
smeo04090
]
Proteins
124396799 (itga3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
FG-GAP_2
Pullul_strch_C
CarG-like
Collectrin
Motif
Other DBs
NCBI-GeneID:
124396799
NCBI-ProteinID:
XP_046722066
LinkDB
All DBs
Position
14:complement(18741536..18784674)
Genome browser
AA seq
1069 aa
AA seq
DB search
MGSEMTSQLGMLRTALCVLVFSSACAALNLDTRFAVVKEGRTPGSLFGLSVAMHRQTVGR
ARYLLLVGAPKEKAEPTLQANQTGDMYACPITTDPTDCIRTNLISSDNVDAEDIIEGMWL
GVSVVSQGLQEGRVMACGHRYSRSMDNGANLRMIGKCYIRGNDLSYDDTNDSQWQYRQEV
CSPNGNQLMEGMCNMGISATMTETEVIAGAPGCYNWQGNSYVVYRNPDDSFDTQIIKLQD
MEIGNIYIGYSVGKDKGILSKAEDTVVAGAPRYQSKGSVMLMKVITIGGGIRELKDLNLT
LEGEQVGSYFGNSIAIVDINNDGWKELIVGAPFYFNRRKEEGGAVYVFMNENGSFKPKTD
LIFTGPRDSGFGMAVASIGDVNQDGFQDFAVGAPYHGSGRVCVWIGGKDGVSPKPSQVIE
GKDVSNGGFKTFGYSISGGLDVDDNKYPDIVVGSLDDRVALIRSRPVIHLKYDFTVTPSI
IDPNSCESCIAVTVCFSYTLSTGGLNFKGDITMKYTVEADVQQRSSQTRVRFIASDKDVY
SGLLSMPTQHCETQRLKVIKPLLNKVNPVVFSLNASILEPQISNDQLQLQDLNLFPVLSH
EQTLTKRTEINFQKACGEDNQCESNLQMTATFAKSQHDILPVEDGKQVLQYDSDIKKLVL
LVNVTNLPTPTRLAEDAHNTELNVSISSSLRYSSVRSETNILVNCAPVDNFILCKLGNPL
AANQRVVFAITFEMTSITLDTQEISATLQLSTLSIQNDLMPLTKVLLVDYTLKTTLQVIP
SRVQTEFSGHVVGDTAIKSTSEIGSPVEFNFTVRDIPVRSHSVFYIDFNWPMEVANGKWL
LYIEKIIMTGTSMSTCVPPGEIVNPRNYEVAKDRKSSRRKRDEQSVAPLEALSAVNLKSA
RRKIDHLNCTSGTAKCTSFSCFLNNATDMAAVTVQARLWNATMLEDYNKASQIFIIGEAT
LKLKTDRASIRLGNQTSHVTFSVEVTPVLSDKVVDKVPLWIIIVSALAGVLLLAFIVLLL
WKCGFFRRALYFRTMAKYHGVRMCREQRTLIENGNKKKHWITNWNDTPQ
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcgaaatgacgtcacaactcgggatgctccggactgcgctgtgtgtgctcgtg
ttctccagtgcgtgtgccgctttgaacctggacacacgctttgccgtggttaaggaggga
cgcacacccggaagcctgttcggactctcagtagcgatgcaccggcaaaccgtggggcgc
gcgcgttacctgctgctggttggtgcaccaaaagagaaagcagagccgacgttacaggct
aatcaaacaggagatatgtatgcttgcccaatcactacagaccctacagactgcataagg
acaaaccttatcagctcagacaatgtggacgcagaagacattatagagggaatgtggctt
ggcgtgtcagtggtcagtcaaggtttgcaggaagggagagtgatggcctgtggtcatcgc
tacagcaggagcatggacaatggcgcgaacctgcggatgatcggaaagtgttatatccgg
gggaacgatctgagctacgacgacacaaacgatagccaatggcagtaccgccaggaggtg
tgtagtcctaatggaaaccaattaatggaggggatgtgtaatatgggcatctcagccacc
atgacagaaactgaggtgatcgccggagctccgggctgctacaactggcaaggtaattca
tatgtggtttataggaacccagatgactcgttcgatacgcagattatcaaacttcaagac
atggaaatcggaaacatttacattggttactctgtgggtaaagacaagggaatattaagc
aaagccgaagacacagttgtggctggagcaccaaggtaccaaagtaaaggctcagtgatg
ctaatgaaggtcatcacgattggcggtggcattagagagctgaaggatttgaatttaacg
ctggagggcgaacaggtcggctcgtacttcggaaacagcatcgctatcgtcgacatcaat
aatgacggatggaaggagctgattgttggagcgccattttattttaaccgcagaaaagag
gagggtggggctgtgtatgtgttcatgaatgaaaatggctcattcaagccaaaaactgat
ctgatattcaccggtccaagagactcagggtttggcatggctgtggcttccattggggat
gtcaaccaggatggttttcaggattttgcggtcggagctccatatcacggctcaggcagg
gtgtgtgtgtggattgggggaaaagatggagtttcacccaaacccagtcaggtgattgag
gggaaggacgtgagtaacggtggcttcaagacgttcggatactccatcagcggtggtctg
gatgtagacgataataaatatcctgatattgttgtcggctctctggacgatcgagtggct
ttaatcagatctcggcctgtcattcacctgaaatatgatttcaccgtgacaccttcaatc
atcgacccaaatagctgtgagtcctgcattgcggtcacagtgtgtttctcctacacactc
agcacaggagggctaaattttaaaggcgacattactatgaaatacacagtggaggctgat
gtccagcagcgctcgtcccaaacccgcgtccgctttattgccagtgacaaagacgtgtac
agtgggttattatcgatgccgacacagcattgtgagacacagagacttaaagtgataaag
cccttacttaataaggtgaatccggtggtgttctcgctgaacgcatcaatccttgagcct
cagatttccaacgatcagctgcagctacaggacctgaacttgtttcctgtgctcagtcat
gagcaaaccctcaccaaaagaacagagattaactttcagaaagcgtgcggagaggataat
caatgcgagagtaacctgcagatgaccgccacgtttgccaaaagccagcatgacatcctt
cctgttgaggatggtaaacaggtcctgcagtatgactctgacattaagaaactggtgctt
cttgttaacgtgacaaaccttccaacaccgacgcgattagctgaagatgctcataacaca
gaattgaacgtctcaatttcctcctcgctcagatactcctccgtcagatctgagactaat
atactagtaaattgtgctcctgtagacaatttcattctgtgcaaattgggaaacccatta
gctgcgaatcagagggtcgtctttgcaatcaccttcgagatgacatccatcacgctcgac
acgcaagaaatctctgcaacacttcagctctctacactgagcatacaaaacgacttaatg
ccgctgaccaaagtgctgctcgtggactacacattaaagaccacacttcaagttattcct
tctcgggtacaaacggagttcagtggccatgttgttggcgacactgctataaaaagcacc
agcgaaatcgggagtccagtggagttcaattttacagtgcgagatataccagtccggagc
catagcgtattttacatcgactttaactggccaatggaggtggcaaacggaaagtggctt
ctgtacattgagaaaattataatgactggaacttcaatgtccacgtgtgtgccaccaggt
gaaatagtcaatccaaggaattacgaggtggcgaaagatagaaagagcagtcggagaaag
agagatgaacagtctgtcgctcccttagaagctctgtctgctgtcaacctgaagagcgcc
cgcagaaaaattgaccatctgaattgtacatcaggtactgcgaaatgtacgtccttcagc
tgcttcttgaacaacgctacggacatggcggcggtgacggtgcaggcgaggctatggaat
gccactatgttggaggattacaacaaagcctcgcagattttcatcattggagaggcaaca
cttaaactgaagacagaccgagcaagcatccgtctgggcaatcaaaccagtcacgtgact
ttctctgtggaggtgactccggtgctgagtgataaggttgtggataaagtgcccctgtgg
atcattatagtctccgcgctagccggagttcttctgctcgccttcatcgttctgcttctg
tggaagtgcgggttcttcaggcgggcgctttatttccggacaatggccaaataccatgga
gtgaggatgtgtcgagagcagcgcaccctaattgagaatggcaataaaaagaagcactgg
attacaaactggaatgacacaccgcaatga
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integrated database retrieval system
