Silurus meridionalis (southern catfish): 124396801
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Entry
124396801 CDS
T08004
Symbol
usp43b
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124396801 (usp43b)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124396801 (usp43b)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124396801 (usp43b)
Peptidases and inhibitors [BR:
smeo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124396801 (usp43b)
Ubiquitin system [BR:
smeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124396801 (usp43b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF2397
Motif
Other DBs
NCBI-GeneID:
124396801
NCBI-ProteinID:
XP_046722070
LinkDB
All DBs
Position
14:12518166..12615247
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AA seq
1215 aa
AA seq
DB search
MEKREQQVKKGTSRKFKATKHKEKKRAVGKPFRKKSFKSVGTFVARIFKSLGAWTHGRHA
AEPLDAEDDDGGFRVAAPCTTSASVRKEEERERSGRTSTLQTRSSLRERLSLSYGEKTPG
VLGLKNHGNTCFMNAVVQCLSNTDLLAEYLGLAQYKMDIGENMMNHAKKVRSEDAQLAPG
EVTEQLAALVRALWTLEYTPQLSVEFKMIVSKYGSQFRGNSQHDALEFLLWLLDRIHEDV
NSSLSSSCGNNRTKTNGKDIGGGEDLAMSDLPDQQPGVRHSFVQEHFQAQYKSSLTCPHC
LKQSHTFDPFLCISLPIPLRQTRPLCVTLVFSTKGQRYLRVGLAVPLFGSLACLRRMVAD
EGKISPDQVILTEMYSTGFQRSFFDDGDLTSIAENDVIYAFQAPPLYIRGGSTRISGYHH
SLPSSPYSLSGAEAKRLAASGALSSEFLNHGGGTAKILLLVCNATGADQQAVRFGPPFLM
REDKSVSWDQLQQSILSKLYYLMISGAQPQNNRVLFKIRVVGGSVSCSYLNPQDGRPLYH
PAVDRALKLCGAGGPPHVKLIVEWEHRIKDCLFGNIQEEVVKDCESVRAQQQQHVQQHSC
TLDECFQLYTKEEQLAPDDAWKCPHCKQLQQGMVQMSLWTLPDILILHLKRFRQVGERRN
KLSTLVRFPLTALDMAPHMVKRSNCTRLPSTWKQQLHQRTDHPEDFLYDLYAVCNHHGGM
HGGHYTAFCRNSVDGQWYSYDDSSVEPVPEGDVCTRGAYILFYQRRNSIPAWSASCSLRG
STSSSMSNHWLVRLASVSEESQTLSPTTKTSSGSSAPEPQTPTSPVFYEQPKVEVDGFET
RPFVRGTQGRSVSLRSPTKNKENLGKVLPLRWSLGSKDRKKVTSVPPTTTPHPVELVEYL
ESGRRPRCTKEPIVSLVASPAQGKAQLPVEDSLSSPSSSSGLSGADRGSCRETDSPRIPE
GQSRPSSIRSATKGRDESLLSRRSSKRRQEQHGKSQDGHSSRESTAGLQPGSSSAQGLSY
STGESKDSTLKRIWNQPAVATRTSGSQNQQDDVAGSRSDEVQGIPAFLMPGNVKKDNQSK
DIRAKEAGQGRTLSNKSSNKLSVSNGTPNGLVVEEKKGNGTHRSSSARYYNKTQINGKES
SIGSGGNIKRALSSSSLQSRLDMNLRRTVSLQRNGLLVPSQKGCTADKPSYNTLQRNRYS
TTSLGRQRPVPESCF
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcgcgagcagcaagtaaagaaggggacatcgcggaaattcaaggccaccaaa
cacaaggagaaaaagcgagccgtcggaaaaccgttccgcaagaagtcatttaaatcagtc
gggactttcgtggcgaggatttttaaaagtttaggcgcctggactcacggcagacacgcc
gccgagccgctggacgccgaggacgatgacggtggattccgggtcgccgcgccgtgcacc
acttcggccagtgtgaggaaagaggaggagcgggagcgctcggggagaacttccactctc
cagacgcgcagttcactcagagagcggctttcgttgtcttacggcgaaaagactcccggc
gtcctggggctgaagaaccacgggaacacctgcttcatgaacgccgtggtgcaatgcctg
agcaacaccgacctgctcgctgagtatctcggcttggcgcagtataagatggacattggt
gagaacatgatgaatcacgcgaagaaagtgaggagtgaagacgcgcagctcgctccgggg
gaggtgacagagcagctggcggcgctcgtgagggcgctctggacgctggagtacactcca
caactctcagtggagtttaagatgatcgtgtccaagtacggctctcagttccgtgggaat
tcccaacacgatgcgctggagttcctgttgtggctgcttgaccgcatccacgaagacgtc
aactcatcattatcatcctcatgtggaaacaacaggaccaaaaccaatggaaaggatatt
ggaggaggagaggatttagctatgtctgaccttccagatcagcagcctggtgtacgtcac
agctttgtacaggagcacttccaggcgcagtacaagtcatccctgacatgccctcattgc
cttaagcagagtcacacctttgacccattcctttgcatctcccttcccattcctttgcgt
cagaccaggccactgtgtgtgactctggtgttcagcactaaagggcagaggtacttaaga
gtgggactggctgtgcctttattcggctctctggcttgcctgcgcagaatggtggcagat
gaaggcaagatttccccagaccaagtgattttgactgaaatgtactctaccggtttccag
cgctcattctttgatgacggcgacttgaccagcatcgcagaaaacgatgtcatttatgcc
ttccaagccccgcctctttacatcaggggaggatccactagaatatctggctaccatcac
agtctcccttcttccccctattccttgtctggggccgaggcaaagaggctggctgcatcc
ggtgcactctcctccgagttcctcaaccatggaggtggaacagcaaagattctcctgctg
gtgtgcaatgccactggagcagatcaacaagctgtgaggtttggtcctccattcctgatg
agagaggacaagtcagtgtcatgggaccagctgcagcagagcatcctcagtaagctgtac
tacctgatgatcagtggagcacagccacagaataacagagtcctgtttaagatccgtgtt
gttgggggatcagtgtcctgtagctacctgaatccgcaggatggacgtccactttaccat
cctgcagttgacagagctctgaagctgtgcggcgcaggcggtcctccacatgtgaagctg
attgtggagtgggaacacagaataaaagactgtctctttggtaacatccaggaggaggtg
gtaaaggattgtgaaagtgtacgtgcccagcagcagcagcatgttcagcaacatagctgc
acactggacgagtgctttcagctttatactaaagaagagcagctggctccggatgatgcg
tggaagtgccctcactgcaagcagctgcagcaaggcatggttcagatgagcctgtggacg
ctcccagacatcctcatcctccacctcaagcgctttagacaggtgggggaacgacggaac
aagctctccactctcgtgcgcttccctctcacagccctggacatggcaccccacatggtc
aagaggagtaactgcactcgccttccatccacctggaaacagcagcttcatcaaaggact
gaccatcctgaggacttcctgtacgacctgtatgctgtgtgtaaccatcatggaggcatg
catggaggtcactacacagcattctgtaggaactcagtggatggccagtggtacagttat
gatgacagcagtgtagagccggtaccagagggggacgtgtgtacacgtggtgcttatatc
ctcttttaccagagacgcaacagcatccctgcatggtcagccagctgctcgcttagaggc
tctacaagctcctccatgtctaatcattggcttgttcgtttggcatctgtgtcagaagaa
agccaaaccttgagtcccacaaccaagacctcgagcggctcctcagctcccgaacctcag
acgccaacttctcctgttttctatgagcagccaaaagtagaagttgatggatttgaaacg
agaccgtttgttcgcggcactcagggccgtagcgtgagcctgcgatcacccactaagaac
aaggagaacctgggcaaagtgcttcccctacgctggtctttaggttccaaggaccgtaaa
aaagtcacttctgttcctccgaccacgaccccacatcctgtagaactggtggagtacctg
gaatctgggcggaggccacggtgcaccaaggagccaatagtcagcttggtggcaagtcct
gctcaaggtaaagcccagcttcctgtggaagactccctcagctcccctagcagtagcagc
ggcttaagtggggcagatcgaggaagctgtcgtgagactgactcgcctcgaatacccgaa
ggccagagcagaccatcttcaatcagaagtgctactaagggcagagatgaaagtttactc
tccaggaggagttcaaagaggaggcaggagcaacacggaaagtctcaagatggtcactct
agtcgagaatccactgctggccttcagcctgggtctagctcagctcaaggtttatcttac
agcacaggtgaaagcaaagattccacattaaagcgaatttggaaccagccagcagtagct
accaggacttcaggtagtcaaaaccagcaagatgacgttgcaggaagcaggagtgacgag
gttcagggaatcccagcattcctaatgccaggcaacgttaagaaggacaaccagtcaaag
gacatacgcgccaaagaagcaggtcaaggaaggacgctatcaaataagagctcaaacaag
ctgtccgtatccaacggcactccaaatggactagtagtggaggagaagaaaggtaacggc
acccacaggagcagcagcgcacgttactacaataaaactcagataaatggaaaggagtcc
agcattggtagtggtgggaatattaagcgagcactaagctcatccagccttcaaagcaga
ctggatatgaatctgaggaggacagtgtccctccagaggaatgggctgctcgttccttct
cagaagggatgcactgctgataaaccatcctacaatacattgcagaggaacagatatagc
accacatcacttggcaggcagagacccgtgcctgagtcctgcttctga
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