Silurus meridionalis (southern catfish): 124396840
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Entry
124396840 CDS
T08004
Symbol
gjc1
Name
(RefSeq) gap junction gamma-1 protein
KO
K07616
gap junction gamma-1 protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeo02000
]
124396840 (gjc1)
Transporters [BR:
smeo02000
]
Other transporters
Pores ion channels [TC:
1
]
124396840 (gjc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Connexin
Motif
Other DBs
NCBI-GeneID:
124396840
NCBI-ProteinID:
XP_046722121
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Position
14:complement(7000287..7024711)
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AA seq
474 aa
AA seq
DB search
MSWSFLTRLLEEIQNHSTPVGKLWLTALVVFRIVLTAVGGESIYYDEQSKFVCNSGQPGC
ENVCYDAFAPLSHVRFWVFQIIFSAMPSLLYMGYAANKISRTKEMSGTGDGDPAGGGAEG
GYTHRRPKKLYFGARQLRAGHENPGEEKEDDPMIYEVPELDNTRQELVPPRPKPKVRHDG
RRRIRDDGLMRVYVLQLLTRSALEAAFLAGQYLLYGFHVAPIYVCTGKPCPHRVDCFVSR
PTEKTIFLRIMYGVSCLCLLLNVWEMIHLGVGTIKDALQKRHAAAEEEYQLGLLGAAGMS
DRISVPALNEGEMVDDVGSRVREADYVGYPFSWNTPSAPPGYNIVMKPEAMPYTDLSNAK
MACKQNRANIAQEEQQQFGSNEDNFPSASDARPPPVNEDAVQLEAAIQAYALQHSASNSH
NEMHDNHNNDDKPQSNIPTVSQKDRKHRLKPGKAGSAGSSSSSKSGEGKPSVWI
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagctggagcttcctgacgcgtctgctagaggagattcaaaaccattccacaccagta
gggaaactctggcttaccgcactggtcgtattccgcatcgtgctgacagcagtgggtgga
gagtctatctactatgacgagcagagcaagtttgtctgcaactcaggccagcctggatgt
gaaaacgtctgctatgacgcctttgcgccactctcacatgttcggttctgggtattccag
atcatcttctctgccatgccatcactcctctacatgggttacgcagctaataagatctct
cgtaccaaagagatgtcagggaccggggatggggatccagcagggggtggagcagaaggt
gggtacacacatcggaggccaaaaaagctgtacttcggggcacgtcagcttcgggcaggc
catgagaatccaggcgaggagaaagaggatgacccaatgatctatgaggtgcctgagcta
gataacactcgacaggagcttgttccaccacggcccaaacccaaagtgcgccatgacggg
cgacggcgtattcgggacgatggcctgatgcgagtgtatgtactacagctgctgacgcgt
tcagctctggaagcagctttcctggccggacagtatctgctgtatggcttccatgtggca
cccatctatgtgtgtactggtaagccttgcccacaccgggtggactgttttgtttcacgg
cccacagagaagaccattttcttgcgcatcatgtacggcgtcagctgcctctgtttgtta
ctaaacgtatgggaaatgattcaccttggagtgggcactatcaaagatgccctgcaaaaa
cgtcatgctgctgctgaggaagaataccagctgggcctgctgggggctgcgggcatgtct
gacagaataagcgtgccagcactcaatgaaggagaaatggtggacgacgtcgggagcaga
gtcagggaggcagactatgtgggctatccgttctcctggaacaccccatctgcaccacca
ggttataacatcgtgatgaagcctgaagccatgccctacacagacctgagcaatgccaag
atggcatgcaagcagaaccgtgccaacatcgcccaagaggagcagcagcagtttggttcc
aatgaggacaacttcccttcggcgagtgatgctcggccgccaccagtcaacgaagatgct
gtgcagttagaggcagctattcaggcttatgccctccaacacagtgccagcaatagccat
aatgagatgcatgataaccacaataatgacgataagccacaaagtaacatcccaactgtt
tctcagaaggacaggaaacatcggctaaaacctggaaaagcaggcagtgctgggagcagc
agcagtagtaaatctggggagggcaaaccatctgtatggatctga
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