Silurus meridionalis (southern catfish): 124396891
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Entry
124396891 CDS
T08004
Symbol
hrob
Name
(RefSeq) homologous recombination OB-fold protein
KO
K27803
homologous recombination OB-fold protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124396891 (hrob)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
124396891 (hrob)
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Gene cluster
GFIT
Motif
Pfam:
HROB
Motif
Other DBs
NCBI-GeneID:
124396891
NCBI-ProteinID:
XP_046722213
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Position
14:4581421..4590268
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AA seq
582 aa
AA seq
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MTTAACSKWRALFSVEDVDDDDLLEADWTHLSSSRPSAVLAGAPLQDLEADGSHDAQQSS
MAPSAKSSVPDSVAQLSSISESRPVKALRNLANSNSSSVFKVVSFTHPASLQAPSDSSKA
ISSLQDSSTSQSGQPNPQPSICTFLKEDISSQDDFDDWDVDLDELDECVSYKPSDPDPDI
SPAKRTRTSPSSADTPVVSSLRRFCNTTPKSAPPAVQPLAVPSACRFTSPVTPGPARGTS
RWQRGAVTPRAENRSLFQAVSPASVTSQPPRPLHMPVLTNHLVQLVSAASKTPQRPRSDS
VRPKTRRFPGPAGALPQQISGRSLDDIVVAVPQTPAHGAVARLRTEVPSSQGNDEEEFSV
GPWATMKAEMGLDERNPSCFLNSYSIVMVLRKAALRQLSKNKVPNMAVVLKSIVHTHADA
KAVFRDPTGEMQGTVHRRLLEERQWELKTGAVLLLKQVGVFSPSNRNHYLNVTPNNLLRI
YPPGGAVHVFSQHSQPALDPAGLLHCQKATSEGGPVSQMELHFEEEGEEEDVEQCSVSAK
LMLPDNSMVESGTRPDCSADAQWDADDLDEMLGELPVESYSA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgcggcttgcagcaagtggagagcactcttcagcgtggaagatgtggatgat
gatgacttgctagaagcagactggactcacctgtcaagttctaggccatctgcagttcta
gccggtgcccccttacaagatttggaagcagatggttcccatgatgcacagcagagctcc
atggcaccatcagccaagagttcagtgccagactctgtggcacaactttcatctatttca
gaatccagacctgttaaagctttaagaaacttggccaactcgaactcctcatctgtcttc
aaagtggtctcttttacacatcctgcttctcttcaagcaccttctgatagctctaaagca
atctcatcactgcaggattcctcaacttctcaatctggccagccaaaccctcaaccaagc
atttgcacttttctcaaggaagacatctcttcccaggacgactttgatgactgggatgta
gatctggatgagttggacgagtgcgtttcttataagccttctgacccagacccagacatt
tctccagctaaacgcacgagaacatcccccagcagtgcagatacaccagtcgtatcttct
ctcagaaggttctgcaacactactccgaaatccgcaccccccgcagtccaaccacttgct
gtaccttctgcttgccgcttcaccagtccggtgacacctgggcctgcgagaggaacatct
cggtggcaaagaggagctgtgactcctcgagcagaaaaccgctctctatttcaggctgta
tctcctgcttctgtgacttcacaaccaccccgtccactacacatgcccgttctgactaat
cacctggtccagctggtgtctgcagccagtaagacccctcagagaccaaggagtgattct
gttcgacccaagactcggcgctttcctggtccagcaggtgctctgccacagcagatcagt
gggcggagcctggatgacattgttgtggccgttccacagacaccagcacacggggctgtt
gctcgcctacgcactgaggtcccgagctctcaaggaaacgacgaagaggagttcagtgta
ggtccgtgggcaacaatgaaggcggaaatgggattggacgagagaaacccttcctgtttc
ctcaattcctacagcattgtcatggtgctgcggaaagcagccttaaggcagctgtcaaag
aataaggttcctaacatggctgtggtattaaagagcatcgtacacacacacgctgatgcc
aaagcggtgttcagagaccccacaggtgagatgcagggtacagttcacagacggctgctg
gaagaacgacagtgggagctgaagactggagcggttctgctgctcaaacaggtgggtgtg
ttctccccctctaataggaaccattatctgaacgtaacgcccaataatcttcttcgaatc
taccctcctggtggagcagtccacgtcttttcccagcattcccagcctgcactggatcct
gctggattactgcactgtcagaaggccacatctgaagggggtcccgtgtctcaaatggag
ctgcattttgaggaggagggggaggaggaggatgtggagcagtgcagcgtctcagccaaa
ctcatgctcccagataatagcatggtagagtctggtacacgacctgactgctcagcggat
gctcagtgggatgcagatgatctcgatgagatgcttggggagttgcctgtcgagtcttac
agtgcctga
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