Silurus meridionalis (southern catfish): 124396920
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Entry
124396920 CDS
T08004
Symbol
xylt2
Name
(RefSeq) xylosyltransferase 2 isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
smeo00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
smeo01100
Metabolic pathways
Module
smeo_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
124396920 (xylt2)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
124396920 (xylt2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smeo01003
]
124396920 (xylt2)
Enzymes [BR:
smeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
124396920 (xylt2)
Glycosyltransferases [BR:
smeo01003
]
O-Glycan biosynthesis
Glycosaminoglycan
124396920 (xylt2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
124396920
NCBI-ProteinID:
XP_046722263
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Position
14:complement(13659367..13686065)
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AA seq
866 aa
AA seq
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MVASTRVQKLLRRYKLAIAAALTILLIQGLVVWSLRSLEEGEAERRERRSKLPDHNNQDV
RKASEAKGQNALSGGYYGRGNHDMERPVVTRPIRKGGKRRMKPSMIEEVGVVPGAGDVIA
PYDPSSSRNFTDTKGQDGGKFPPGVQGEPGSVDGAAQVPSNDFVPSCEIVGKDALSALHR
AGSRQCRQEIANIVCKHQAGELMPQSLPQYCTQHGILSSAGQQADIIDNDLSKVENPVRV
AFVLMVHGRAVRQLKRLLKAIYHKDHFYYIHVDKRSNYLHREVLHLADLYPNVRATPWRM
VTIWGGASLLKAYLHCMQDLLSMLDWKWDFFINLSATDFPTRTNDELVAFLSQNRDKNFL
KSHGRENARFIKKQGLDRLFHECDNHMWRLGERTIPEGLDVSGGSDWFSLTRRFVEYVVS
TKDELVTGLKQFYTYALLPAESFFHTVLGNSHMCDTLVDNNLRVTNWNRKLGCKCQYKHI
VDWCGCSPNDFKPADLIRIQQLTRPTFFARKFESTVNQEAIYILDTHLYGQYPPGTVALK
AYWESLFEREDGVGTLTDVALTAYMSFFRLGLSSQKTMHEACRFVPVAYPISVHLYFYDD
RFQGYLVRQEVKSMAPGKNEMLEVWVVPQATLQLESNLNEFERLKNLEVGTEWDPKERIF
RNFGGVMGPLDEPVAVQKWARGPNLTATIVWIDPAQVVAASYDISVDVEAEFTQYKPPLQ
RPLRPGVWTVRVLRLWERVAEARFLVIPLVFKGKEPFHKEEHSWLHAGPAGNFYLEQGFQ
QLAQVLKLPPMEPALEESKKKASLVGKALEGWVDSLVGAFWVTGDMCSTQSSLCPSVQPC
AKTSWSSLSSDPKSELGAVKSNGRIR
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgagcactcgggtccagaagctgctacgtcgctataaacttgcaatcgccgct
gctttaacgatcctcctgatccagggtttggtcgtatggagtctccggagtctagaggaa
ggagaggctgagcgcagggagcggcggtctaagctgcctgatcacaacaaccaggatgtg
aggaaagcctcagaagccaaggggcagaatgccctgtctgggggctactatggccggggg
aatcacgacatggaacggcctgttgtcactcgtcccatcaggaaaggggggaagcgaaga
atgaagccctctatgatagaagaagtcggagtggtgccgggagctggagatgttattgcc
ccgtacgatccatccagcagccgtaacttcaccgatacaaaagggcaggacggaggaaaa
tttccaccaggcgttcagggagaaccagggagcgtcgatggtgccgctcaggtcccgagc
aacgactttgtgcccagctgtgagattgttgggaaggacgctctgtcggccctgcaccgt
gccggatcacgccagtgccggcaggaaatcgctaacatcgtgtgcaaacaccaggctgga
gagctgatgccacagtctttacctcagtactgcactcagcatggtattttgtccagtgct
ggacagcaagctgacattatagacaacgacttgtccaaagtggagaacccagtcagggtg
gcgttcgtgctgatggttcacggtcgagccgtgaggcagctgaaacggctcctcaaagcc
atttatcacaaagaccatttctactacattcatgtggataagcgctccaactacctgcat
cgtgaagtcctgcacctggctgatctgtacccgaacgtgagggccacaccctggcgcatg
gtcactatctggggcggggccagtctgctgaaagcctacctgcactgcatgcaggacctg
ctctctatgctcgactggaaatgggatttctttatcaacctgagtgccacagatttcccc
actaggaccaacgatgagctggtggctttcctctcacagaaccgtgacaagaacttcctg
aagtctcatggcagagagaatgccaggttcattaagaaacaaggtttggacagactcttc
catgagtgtgataaccacatgtggcggctgggtgagcgcaccatccccgagggcctggac
gtgtccggcggctctgactggttttcactcacgcgccgctttgtggagtacgtagtcagc
actaaggatgagctggtgaccggactgaagcagttctacacctatgccctgctccctgct
gagtctttctttcacacagtcctgggcaacagccacatgtgtgacacgctagtggacaac
aacctgcgagttactaactggaatcgcaagctgggctgcaagtgccagtacaagcacata
gtggactggtgcggatgctctcccaatgacttcaaacctgctgatctcatccgaattcag
cagctgacacggcccacattcttcgcccgaaagtttgaatccactgtcaatcaggaggcc
atttatattcttgatacccacctgtacgggcaatacccaccaggcactgtggcgctcaag
gcctactgggaaagtctgtttgagcgggaggatggagtgggaactctcaccgatgtggca
cttacagcctacatgtccttcttcagacttggtctctctagtcagaaaaccatgcatgag
gcttgcaggtttgtgcctgttgcctaccctatatctgtccatctctatttctacgacgac
cgtttccagggctacctggtgcgccaggaggtgaagagcatggcacctgggaagaatgaa
atgctggaggtttgggttgttcctcaggccactcttcagctagagagcaacctgaacgag
tttgagaggttgaagaaccttgaggtgggaacagagtgggaccccaaggagagaatcttc
cggaactttggtggagtgatgggcccgttggacgagcccgtagcggtgcagaaatgggca
cgtggccccaacctcacagccaccatagtgtggatcgatccggctcaggtggtagcggca
tcttatgacatcagcgtggacgtagaggcggagtttacacagtacaagccaccgcttcag
cgtcctctcaggcccggagtgtggacggtccgtgtgctgaggctgtgggagcgtgtggcc
gaagctcgctttctggtcatacctctagtttttaaaggaaaggagccatttcataaagag
gagcacagctggctgcacgcaggtcctgcaggcaacttttacctggagcagggcttccag
cagcttgctcaggttctgaagctgcctcccatggagcctgctctggaggagtctaagaag
aaggcctctctagtgggcaaggctctggagggttgggtggacagcttagtgggtgccttt
tgggtaactggagacatgtgttccactcagagctccctttgtcccagcgtacagccctgc
gccaagactagctggagctctttgtcctcagatcccaaatccgaactcggtgcggtaaaa
agcaacggccgcatcaggtag
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