Silurus meridionalis (southern catfish): 124396993
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Entry
124396993 CDS
T08004
Symbol
igf2bp1
Name
(RefSeq) insulin-like growth factor 2 mRNA-binding protein 1
KO
K17391
insulin-like growth factor 2 mRNA-binding protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124396993 (igf2bp1)
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124396993 (igf2bp1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
RRM_1
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
MOEP19
KH_5
KH_Vigilin
RBD_DEAH11
RRM_9
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
124396993
NCBI-ProteinID:
XP_046722366
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All DBs
Position
14:9666885..9708117
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AA seq
597 aa
AA seq
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MNKLYIGNLNENVTAEDLVKTFEDYKIPYTGQFLVKTGYAFVDCPDDQWAMKAIETFSGK
VELHGKRIEVEHSVPKKQRTRKLQIRNIPPDLQWEVFDSLLAQCGTVENCEQVNTESKTA
VVNVTYATREQARQAIQKLNGYQFDNNALRVSYIPDESLEVDSQRSPDNGRRSGYGARVN
SRQGAPGTGMPSKHQHTDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENA
GAAEKPISIHSTPEGCSAACRMILDIMHQEAKDTKTADEVPLKILAHNNFVGRLIGKEGR
NLKKVEQDTDTKITISPLQDLTLYNPERTITVKGAIEACCLAEQEIMKKVREAYDNDIAA
MNQQTHLIPGLNLGALGLFPPSSSMPPPPPGNAGVCPPYGSFGAPEQETVHVYIPAQAVG
AIIGKKGQHIKQLSRFAGASIKIAPAETPDSKMRMVIVTGPPEAQFKAQGRIYGKLKEEN
FFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEVVVPREQTPDEQDQVIVK
IIGHFYASQLAQRKIRDILTQVKQQQKGGMGAPQASHPQNLSELGPQQGMTQEPRRK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagctatatattggaaatctgaatgaaaatgtgaccgctgaggacttggttaaa
acctttgaagactacaagattccttacactgggcagtttctagtgaaaacgggatacgcg
tttgttgattgcccggacgaccaatgggctatgaaagcaattgaaacattttcgggtaaa
gtggaacttcacggcaaacgaattgaagtagaacattctgtccctaagaaacaaaggacc
aggaaactccagattagaaacattccaccggatttacaatgggaggtgtttgatagtcta
cttgcccagtgtggaactgttgaaaactgtgaacaagttaacacagaaagcaagacagct
gtggtgaatgtcacttatgcaacgcgggagcaggccagacaagcgatccaaaagctgaat
ggttaccagtttgacaacaacgctttgcgagtgtcctacataccggacgagagtttggaa
gttgactcacagcgcagccctgacaatggtcgtcgctctggttatggtgctcgtgttaac
tctagacagggtgcccctggcacagggatgccctctaagcatcagcacactgatatacct
ctccgtttgcttgtaccaacccagtatgtgggcgccatcatcggcaaagagggtgccacc
atccgcaacatcaccaagcagacacaaagcaagattgatgtccaccgtaaagagaatgcc
ggtgccgcagaaaagcccatcagcatccactcaactcctgagggctgctcggcagcctgc
cgtatgattctcgacatcatgcaccaggaagccaaagacaccaaaactgctgatgaggta
cctttgaagatccttgcccacaacaactttgtcggtcgtctgattggcaaagaggggcgt
aatttgaagaaagtagaacaagatactgacactaaaatcaccatttcaccgctacaggac
ctgactctgtataaccctgaaaggaccatcacagtaaaaggtgccattgaggcttgttgt
ctggctgaacaggaaatcatgaaaaaagtgcgagaggcttatgataacgacatcgctgcc
atgaatcaacagacacacctcattccaggactgaacttaggagcgcttggccttttccct
ccatcctcctccatgcctcctcctccacctggaaacgctggagtttgccccccatatggc
tcctttggggctcctgagcaggagacagtccatgtgtacatcccagctcaagcagtggga
gctatcatcggcaagaagggccagcacattaagcagctgagccgctttgccggggcctcc
ataaagattgcaccagcagagacacctgattcaaagatgcgcatggtcattgttactggt
ccacctgaggcacagtttaaggctcagggaagaatatacggcaagctgaaggaagagaac
ttttttggaccgaaggaagaagtgaagctagagacgcacatcaaagtagcagcagctgct
gctggcagagttattgggaagggtggaaagacggtgaatgaactacagaacctaaccgca
gctgaggtggtggttcctagagagcagacccctgatgagcaggaccaggtcattgtcaaa
atcatcggccacttttatgcaagtcagctggcccagaggaagatcagagacattttgaca
caagttaagcagcagcagaaaggtggcatgggagccccacaggcatctcacccacagaac
ctgtccgagcttgggcctcaacagggaatgacccaggagcctaggaggaagtaa
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