Silurus meridionalis (southern catfish): 124397028
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Entry
124397028 CDS
T08004
Symbol
coil
Name
(RefSeq) coilin
KO
K13150
coilin
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124397028 (coil)
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
124397028 (coil)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Coilin_N
Tudor_Coilin
Motif
Other DBs
NCBI-GeneID:
124397028
NCBI-ProteinID:
XP_046722433
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Position
14:18152642..18158702
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AA seq
636 aa
AA seq
DB search
MSQLFLRLTSNMAASSVNAVRVRLYFDYPPPCMPDCRMSWLLVDLNKCRVVADLCSVIRE
KFDYSRKTALDLFIENCFLPPAESIYVVRDNDSIRVKVSSVPCEYAGKKRRREEEGSLQA
PTKKTREEAGEANGVTPPAGVKKKKQKEKKKKPDESVEAYKSELPSAKSQTDKNNKKASA
TSVLTNGNAISSDSSEEVTQKPSQSKFKHAASKRPASRKSSSSKSSSSEEENVRGQKSPK
PSTSLKTRPGTKTTKEQTSSITPKSTANKTQPSSDSSSSEEEASGAAVKKANAPPKSSSS
GKQKSCTVTSKAQPQTVTTSSSSEDDDDDDSRKTSLSGKTSSVQNGGKTVALPQTRPSPS
VRHRNEGTIPTSEKPSGKSKISKTQTSSDSSSSSSEDEANKSNPLATPKPVVKNGATQPP
STPVGTTLPDNKDKAENSDSSSDTELVIKKPNPQLMIGLTPRGRGRGFPDRLKGRGGVRG
GFGRARGTPWKQNFHYNYDNGDQRKQKEFQTNRSLVLQNPPEPAPQRDYSALPLLAAPPA
VGQKIVFKLLELNENYSPEVSDYKEAKIIGFNHSTNMVELELLTRSHVRTEPGKFDLVYE
NPDGSERVEYAITMGSQLTERWESLLEPRLIVQNTE
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctcttcctgcggctcacaagcaacatggcggcgtccagtgtcaacgcggtt
cgagtccggctgtattttgattaccctcctccctgcatgcccgactgccgcatgagctgg
ctgttggtggatctgaataaatgtcgcgtagttgcagatttgtgcagcgtgattcgagag
aagtttgattacagccgtaaaacagcgttagacctgttcattgagaactgttttctccct
cctgcagagagcatctatgtggtccgggataatgacagtataagggtgaaggtgtccagt
gttccttgtgagtatgcagggaaaaaaagacgcagagaggaagagggttctttgcaagca
ccaacgaagaagaccagggaagaagcgggtgaggcgaacggcgtcaccccaccagcaggt
gtgaaaaagaaaaagcaaaaagagaagaaaaagaaaccagacgagtctgtagaagcctat
aaatcagagcttccatctgcaaaatcccagacagacaagaacaacaagaaagcttcagcg
acttctgtgctcactaatgggaatgcgatttcatcagacagcagcgaggaggttactcag
aaaccttctcaatccaaattcaaacacgcggcatccaagcggcctgcgtcgagaaaatcc
tcttcctccaagtcatcctcctcggaagaagaaaacgttcgtggtcaaaaatctcccaaa
ccaagtacaagcttaaaaacccgtccaggcactaagacaaccaaagagcagacgtcttct
ataacaccaaaatccacagcgaataaaacgcaaccttcttcagattcgtcctcgtcagaa
gaagaagcttcgggagcagcggtgaagaaagcaaacgcccctccaaaatcatcatcatct
ggcaaacaaaaatcctgtactgtcacctcgaaagcgcaacctcaaactgtgaccacttca
tcgtcttcagaagatgatgatgatgatgattccaggaaaacgagcctctcagggaaaacg
tcttcagttcaaaacggcggtaaaacggtggctttaccgcaaacacgaccatctccatcc
gttcgccacagaaacgagggcacaattcctacgtctgaaaaaccttccgggaagtcgaaa
atttccaaaacgcaaacgtcttcggactcctcgtcatcgtcgtctgaagacgaggccaac
aaatcgaaccctcttgccacacccaaacctgtagtaaagaacggagcaactcagccacca
tccactccggtaggaaccacgcttccggacaacaaggacaaagcggagaactcggacagc
agcagtgacacagagctggtgataaagaaaccgaaccctcagctcatgattgggttgact
cctcgagggaggggccggggatttccagacaggctcaaaggtcgaggaggggtccggggt
gggtttggccgggcgagagggacaccttggaagcagaactttcattataactatgacaac
ggagatcagaggaagcagaaagagtttcagactaatagaagcttggtcctgcagaatcct
ccagagccggctccccagcgagattacagtgctcttcctctcctcgctgctcctcctgca
gtgggacagaagattgtttttaagcttttagagctcaacgagaactactcacctgaagtg
tctgattataaagaagcaaagatcattggatttaatcacagcaccaatatggtggaactg
gagcttctgacacgtagtcacgttcgaactgaacccgggaagtttgatctggtgtatgaa
aatccagacggatctgaaagagtggagtacgccatcactatgggttctcagctgacagag
cgttgggagtcgctgctggagcccaggcttattgtgcagaacacagagtaa
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