Silurus meridionalis (southern catfish): 124397115
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Entry
124397115 CDS
T08004
Symbol
mybpc2a
Name
(RefSeq) myosin binding protein Ca
KO
K12558
myosin-binding protein C, fast-type
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124397115 (mybpc2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124397115 (mybpc2a)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124397115 (mybpc2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
THB
FN3_DSCAM-DSCAML_C
V-set
Ig_CYK3_C
Motif
Other DBs
NCBI-GeneID:
124397115
NCBI-ProteinID:
XP_046722571
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All DBs
Position
14:complement(1443910..1466234)
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AA seq
1118 aa
AA seq
DB search
MKIQLAVLAPLRRPGTNLQKSTSGEEREMKESTGLIVERPQSATAIKGKNITFVAKVDSS
KLLRKPVFKWLKGKWLDLGSKAGKHLQFKETYDRNNKIYTYEMTIVKVVEADAGSYRCEV
TGKDKCDSWAFDITVEAAQEAQQTNILEAFKRSGEAGEDAGDLDFSGLLKKRERKQKEEP
QEEVDVWEILKKAKPCDYEKIAFQYGITDLRGMLKRLKMMKKVEQKKSEAFLKKLDPAYS
VEKGKKIQLCVELADPNQQVKWLKNGQEIKPSAKYIFESIGGIRKLTINKCTLSDDAAYE
CVVDEEKCFTEVFVQEPPVTITKLLDDIHVVVGEKVEFEVEVSEEGANVKWMKDGVELSR
DGKYRIKKEGTKHWLIINEATKDDIGMYHVYTSGGESKGELEVEDKELEVLQSIADLTLR
AAEQAVFKCEVSDEKVTGKWFKNGEEVVLSDRIKVSHIGRIHKLTIDDVKPEDAGDYTFV
PDGYAISLSAKLNFIEIKIEYVPHQEPPKIHLDTTGNMVNKNTIIVVAGNKLRLDVEITG
EPAPTVCWKKGDTEITATEGRVRVEHRKNLNSFVIEGAERSDEGPYSITVTNPVGEDKAE
VTIRIVDVPDPPENVHCTGVGEDSASVLWDPPKFDGGSLLKGYLMERRKKGSSRWTKLNF
DIHESTVYEVKKMIEGVMYEMRVFAVNSIGISQPSEVSKPFMPIAPTSEPTRLMVDDITD
NTCALRWLPPERIGAGGVDGYIIEYCLEGGNEWVQANETPVDKTSYRIRDLKVGDKYLFR
VKAVNIAGLSPPAEINQGVTIQEITENPRIRLPRQLRTKFIKKVGEKVNIVIPFQGKPHP
VVRWFKDDDLLDLKLVNIRTTEVDTILFIRSATREHSGKYTLSVQVENMEDRATVEIQVV
EKPGFPVAVTVTDVWGFNAALEWKPPKDNGNTEITGYTIQKADMKTKEWFTVYEHNRRPS
CTVSDLVMGNEYTFRVFSENICGLSEEAGLSKNTAVIPKAGLQYKAKPFKELDMNSSPKF
ITPLVDRCVIAGYSAAISCAVRGSPKPKIIWMKNKMIIGGDPKFIMQNNQGVLTLNIRKP
GLFDGGMYTCRAVNDLGEDQVECKLEVRVVMEKGVEKK
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccagctcgccgttttagcaccgttgcggagacccggcacaaatttgcagaag
agcacatccggtgaggagcgagagatgaaggagagcaccggcctcattgtggagagaccc
cagagtgccacagcaatcaaagggaaaaacataacgtttgtggccaaggtggactcctca
aaacttctaaggaagccggtgttcaagtggctgaaagggaagtggttggacctgggcagc
aaagcgggcaaacacctgcagtttaaagaaacctatgacaggaacaacaagatctacacg
tatgagatgaccattgtgaaggtggtggaagcagatgcgggaagttatcgctgtgaggtc
acaggcaaggacaagtgcgacagctgggcttttgacatcactgtagaagctgcacaagag
gctcagcaaaccaacattctggaggccttcaaacgatcgggagaagcaggagaggacgct
ggagacttggatttcagtggtctacttaagaaaagagaacggaagcagaaggaggagccc
caggaggaagtggatgtgtgggagatcctgaagaaagcaaaaccctgtgactatgagaag
atcgctttccagtacgggatcacagacctgaggggaatgctgaagagactgaagatgatg
aagaaggtggagcagaaaaagagtgaagccttcctgaagaagttggatcctgcgtactcg
gtagaaaaagggaagaagatccagctgtgtgtggagctggccgatcccaaccagcaggtc
aagtggctgaaaaatggccaggagatcaaaccttcagcaaagtacatattcgagagcatc
ggtggaatccgaaaactcaccatcaacaagtgcacgctgtcagatgacgctgcgtacgag
tgtgtggtcgatgaggaaaagtgcttcaccgaggtcttcgtgcaagagcctccagtcacc
atcactaagttgctggatgatatccatgttgtggttggagagaaagtggagttcgaggtg
gaagtgtctgaggaaggagccaacgtcaagtggatgaaggatggagtggaattgtctcgg
gatggaaagtatcgaatcaagaaggaaggcaccaaacactggctgatcatcaacgaggcc
accaaggatgacatcgggatgtaccatgtctacaccagtgggggggagtccaagggagag
ctggaggtggaagataaggagctggaggtgcttcagagtatcgctgacctgaccctgagg
gccgctgagcaggctgtgttcaaatgcgaggtttctgatgagaaggtgacaggaaagtgg
tttaagaatggagaggaagttgttctgagtgaccgcatcaaagtgtcacacatcggcagg
atccacaaattgacgattgatgacgtgaagccagaggatgcaggagattacaccttcgtt
cctgacggctacgccatctctctttcagccaaactcaacttcatagaaatcaagattgaa
tatgttccacatcaggagcctccaaaaatccacctggacaccacgggcaacatggtgaac
aagaacaccatcattgtagtggcaggaaataaactgcgtctggatgtggagatcaccgga
gaaccagcgcccactgtctgctggaaaaaaggagacactgagataacggccacagaagga
cgagtgcgtgtggagcacaggaagaacctgaacagttttgtgattgagggagcagaaagg
tcagatgaaggaccttacagcatcaccgtcaccaatcctgtaggagaagacaaggccgag
gtcaccatcaggatcgttgatgttccagatccaccagagaacgtgcactgtactggggtg
ggtgaggactccgcctctgtcctctgggacccgcccaaatttgatggtggctcactgctt
aaaggttacctgatggagaggaggaagaaaggctcgtccaggtggaccaagctgaacttt
gacatccatgagtcgactgtttacgaagtgaagaagatgatagagggcgttatgtacgag
atgagggtgttcgctgttaacagcattgggatctcccagcccagcgaagtctccaaaccc
ttcatgcctattgccccgacgagcgagccgacccgcctgatggttgatgacatcacagac
aacacgtgtgcgctacggtggcttcccccagagaggatcggtgccggcggtgtggacggc
tacatcatcgaatactgccttgaaggagggaacgagtgggtgcaggccaacgagactccc
gtggataagaccagttatcgtattcgagacctgaaggttggagataaatacctgttcaga
gtgaaagcggtgaacatcgcaggcctgagcccaccggctgagatcaatcaaggagtcacc
atccaggaaatcactgagaaccccaggatccgtctgcctcgccagttaaggactaagttc
atcaagaaggttggggagaaggtcaacatcgttattccttttcagggaaaacctcatccc
gtagtgagatggtttaaggatgacgatctgttggatctaaaactggtcaacatccgcacc
actgaggtggacaccatcctgttcatcaggagcgccacccgggaacactcaggaaaatat
accctctctgtccaggttgagaacatggaggacagagccaccgttgagatccaggttgtt
gagaagcccgggtttcctgtcgccgtcaccgtgactgacgtgtggggttttaacgccgcc
ctcgagtggaagccacccaaagacaatggcaacactgagatcacggggtacaccatccag
aaagctgacatgaagaccaaggaatggttcacggtgtatgaacacaaccgcaggccgagc
tgcaccgtctccgacctcgtgatgggtaacgagtacaccttccgcgtgttcagcgagaat
atctgcggcctgagcgaggaggcggggcttagcaaaaacaccgccgtcatccccaaagca
ggacttcagtataaggcaaaaccatttaaagagttggacatgaacagctcccccaagttc
atcacgcctctagtggacagatgcgtcattgcagggtacagcgcagccatcagctgtgca
gttcgtggctctcccaagcctaagatcatctggatgaagaacaagatgataatcggtggt
gacccgaagttcatcatgcagaacaaccagggcgtgctgaccctgaacatccgcaagccc
ggcctgtttgatggaggcatgtacacatgcagggccgtcaacgacttgggcgaggatcag
gtggagtgcaagctggaggtccgagtcgtaatggagaagggagtcgagaagaaatga
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