Silurus meridionalis (southern catfish): 124397130
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Entry
124397130 CDS
T08004
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124397130
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124397130
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124397130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
ANCHR-like_BBOX
SIMPL
Toxin-JAB1
Motif
Other DBs
NCBI-GeneID:
124397130
NCBI-ProteinID:
XP_046722598
LinkDB
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Position
14:14910134..14914601
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AA seq
534 aa
AA seq
DB search
MEEFVSHEQISASTGPDTENDQRESKKVLNVQGKNQECLESTSQQSDNPQPEEVMCDSCI
ETPLKASKSCLTCMVSYCEEHLRPHLENSKFQSHKLVEPQLDLEQRTCEHHQLELQMYCT
KDGCCICPQCETEGHQGHDITPVDEARKLIENELQQKQKEMVKTLTAAEQAINKLQSNSK
SIESSVIGVQAEIEQQFSILQTAIEDARKKAFELLQGEHKQAVSQAESIHSHLTQKMLEL
KKTMGQMERFSKNKNHVDFLQEYTEWKKGSVDVCLSGIYISLIDRLTTFSCIVKESTQAL
CELLLSTYNVQLKELCKSETAGIKTLVHPSSPIKRQAFAPDPVTRDDFLNYATNLSFNPD
STHKFLRLTEDNRKASNTTPWQHNYPDTPERFEHWRQVMTSESLYMGRHYFEVDLSGEGA
YIGLTYKSIARKGQESSSCITGNDFSWCIGRESNGFSAWHSDVETPLEVENFQKIGCYID
YEKGLLAFYGIAETMKLLKECTASFREPLYPVFWLSKKDNAVVLVKPGSSSEVQ
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatttgtttcacatgaacaaatctcagccagcactgggcctgacacagaaaat
gaccaaagagaaagcaaaaaagtcttaaatgttcaaggtaaaaaccaagaatgtttagag
agtacatctcagcaatctgataacccacagccagaggaggtaatgtgtgattcatgtatt
gagacacctctcaaggcatccaaatcctgcctgacctgcatggtgtcctactgtgaggag
cacctgaggccgcatctcgagaacagcaaattccagagccataagttggttgagcctcag
ctggacttggagcagcgcacatgcgagcatcaccagctggaactgcagatgtactgtacg
aaggacggatgctgcatttgtccacagtgtgagacagaagggcaccaagggcatgatatt
actccagtagatgaggcacgcaaactaatcgagaatgagctacaacagaaacagaaggaa
atggtgaaaaccttaacagctgcggagcaggccattaataagctacagagcaactctaaa
tccatcgaaagttcagttattggggttcaggctgaaattgagcagcagttctcaatcctg
caaactgcgattgaagatgctcgcaagaaagcttttgaactcctgcaaggggaacacaag
caagcagtgagtcaggcagagagcatccatagccacctgacgcagaagatgcttgagtta
aagaagaccatgggtcagatggagcgattttcaaagaataagaatcatgttgatttttta
caggaatacacagaatggaaaaagggctcggtggacgtgtgcttatctggtatttacatc
agcctcatagaccgactgaccacttttagttgcattgttaaagaatcaactcaggccttg
tgtgagctgctgctgtccacctacaatgttcagctcaaggaactatgtaaaagtgagaca
gcaggtattaagacgttggtacacccaagttctccaatcaagcggcaagcatttgcccct
gatcctgtgactagagatgattttcttaactatgccaccaacctgagtttcaatcctgac
tccactcacaagttcctgagactcactgaagacaaccgaaaagccagcaacaccacacca
tggcaacacaattaccctgatacacctgagcgctttgagcactggcggcaagtgatgact
tctgagagcctttacatgggccgccattactttgaggtggacctgagtggagagggtgct
tacataggactcacgtacaaaagcattgctcgtaaaggtcaagaaagcagtagctgtatc
acaggcaatgatttttcatggtgcattggacgagaaagcaatggcttctcagcatggcac
tctgatgtagaaactcctcttgaagtagagaatttccaaaagattggttgctacatagac
tatgaaaagggtctgctggccttctatggtatagctgagactatgaaacttcttaaggaa
tgtactgctagcttccgggagccattataccccgtcttctggctctccaagaaggacaat
gcagttgttctagttaagccaggatcaagttcagaagtgcagtga
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