Silurus meridionalis (southern catfish): 124397140
Help
Entry
124397140 CDS
T08004
Symbol
rac1b
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1b
KO
K04392
Ras-related C3 botulinum toxin substrate 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04145
Phagosome
smeo04148
Efferocytosis
smeo04310
Wnt signaling pathway
smeo04370
VEGF signaling pathway
smeo04510
Focal adhesion
smeo04520
Adherens junction
smeo04530
Tight junction
smeo04620
Toll-like receptor signaling pathway
smeo04810
Regulation of actin cytoskeleton
smeo05100
Bacterial invasion of epithelial cells
smeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124397140 (rac1b)
04310 Wnt signaling pathway
124397140 (rac1b)
04370 VEGF signaling pathway
124397140 (rac1b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124397140 (rac1b)
04148 Efferocytosis
124397140 (rac1b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
124397140 (rac1b)
04520 Adherens junction
124397140 (rac1b)
04530 Tight junction
124397140 (rac1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
124397140 (rac1b)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124397140 (rac1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124397140 (rac1b)
05100 Bacterial invasion of epithelial cells
124397140 (rac1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124397140 (rac1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124397140 (rac1b)
04031 GTP-binding proteins [BR:
smeo04031
]
124397140 (rac1b)
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Small GTPases and associated proteins
Rho GTPases
124397140 (rac1b)
Endocytosis
Lipid raft mediated endocytosis
Arf6-dependent endocytosis
124397140 (rac1b)
Macropinocytosis
Ras GTPases
124397140 (rac1b)
Others
NADPH oxidases (Nox) and associated proteins
Nox associated proteins
124397140 (rac1b)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124397140 (rac1b)
Exosomal proteins of other body fluids (saliva and urine)
124397140 (rac1b)
Exosomal proteins of colorectal cancer cells
124397140 (rac1b)
Exosomal proteins of bladder cancer cells
124397140 (rac1b)
GTP-binding proteins [BR:
smeo04031
]
Small (monomeric) G-proteins
Rho Family
Rac/Cdc42 [OT]
124397140 (rac1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
CagD
Motif
Other DBs
NCBI-GeneID:
124397140
NCBI-ProteinID:
XP_046722613
LinkDB
All DBs
Position
14:complement(14952256..14958542)
Genome browser
AA seq
192 aa
AA seq
DB search
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
PVKKRKRKCSLL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccataaagtgtgtcgtggttggagacggggctgttggtaaaacatgcctgctg
atcagctacaccaccaatgcatttcccggagagtacatccccacagtatttgataattac
tctgcaaatgtgatggtggatggcaaaccagtcaatctgggtttatgggacacagcagga
caggaagactatgacaggctccgtcctctctcttaccctcagacagatgtgtttctgatc
tgcttctcccttgtgagtcctgcctcttttgaaaatgttcgtgcaaagtggtacccagag
gtgagacatcactgccccaacactccaatcatacttgtgggaaccaagcttgatctgaga
gatgacaaggacaccattgagaagctgaaggagaagaagcttactcctatcacctacccc
cagggcctggccatggctaaagagattggagctgtgaaatatctggaatgctcggccctg
acacagcgtggccttaagacggtgtttgacgaggcaattcgagccgttctctgcccaccc
cctgtgaagaagaggaagagaaaatgttctctgctgtag
DBGET
integrated database retrieval system
