Silurus meridionalis (southern catfish): 124397153
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Entry
124397153 CDS
T08004
Symbol
rab40c
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124397153 (rab40c)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
smeo04031
]
124397153 (rab40c)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
124397153 (rab40c)
GTP-binding proteins [BR:
smeo04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
124397153 (rab40c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
124397153
NCBI-ProteinID:
XP_046722630
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Position
14:22890206..22903160
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AA seq
278 aa
AA seq
DB search
MGTQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSGIDYKTTTILLDG
RRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREIDEHAPGVP
RILVGNRLHLAFKRQVPTEQARSYAEKNAMTFFEVSPLCNFNVIESFTELSRIVLMRHGM
EKFWKPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMMHGRS
YSLANSGGSKGNSLKRSKSIRPPQSPPQNCTRNNCKIS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgggcactcagggaagcccggtcaagagttacgactacctgctgaagttcctgctggtg
ggagacagtgatgtgggcaaaggggagatcctggacagccttcaggacggatctgcagag
agtccatacgcctacagcagcggaatcgactacaagaccaccacgattcttttggatgga
aggagggtgaagctggagctgtgggacacttctggccaaggccgcttctgtactattttc
cgttcctactccagaggtgcacagggcattctgctggtgtatgacatcacaaaccgctgg
tcctttgacggaatcgaccgctggattcgagagatcgatgagcatgctcctggggttcct
cggattctcgtcgggaaccgtcttcacttggcgttcaaacgtcaggttcctacagagcag
gctcgctcctacgcagagaagaacgccatgacgttcttcgaagtgagtccgctctgcaac
ttcaacgtcatcgagtcgttcaccgaactgtcacgcattgtgctcatgagacacggcatg
gagaagttctggaagccaaaccgagtgttcagcctgcaggacctgtgctgtcgtgccatc
gtctcgtgcacgccggtgcacctgatcgacaagctgccgctccccgtcgccatcaagagc
cacctgaagtctttctccatggccaacgggatgaacgcggtcatgatgcatggacgctcc
tattcgctggctaacagcggcggcagcaaaggcaacagcctgaaacgctccaaatccatc
cggccgccgcagagcccgcctcagaactgcacccgcaacaactgcaagatctcctag
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