Silurus meridionalis (southern catfish): 124397229
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Entry
124397229 CDS
T08004
Symbol
grin2aa
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04020
Calcium signaling pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
124397229 (grin2aa)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124397229 (grin2aa)
04082 Neuroactive ligand signaling
124397229 (grin2aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124397229 (grin2aa)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
Glutamate (ionotropic)
124397229 (grin2aa)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
124397229
NCBI-ProteinID:
XP_046722708
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All DBs
Position
14:complement(22596916..22701800)
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AA seq
1458 aa
AA seq
DB search
MWFSGLALLTLPALLTLVGVAYTAEKVPILNIAVILGXTRYISDRDIRALWSKDDPIDVN
VVTLLVNETDPKSIITHVCDLMSGTKIHGVVFGDGTDQEAIAQILDFISSQTLIPILGIH
GGSSMIMADKDVKSTFFQFGASIQQEALLMLNIMEEYDWHVFSIVTSKFPGYQDFIMILK
TTVDNSFVGWDLQHTITLDVVDGVDGGRSQLQLKRVQSPVILLYCSKDEAAYILEEARSL
GLIGFGYIWIVPSLTTGNPDITPEEFPSGMISVSYDDWDYPLEARVRDGLGIITTAAAAM
LKEFGDIPEAKTSCYGQMEKAKLPPSALHKYMMNVTWDGRDLSFTEDGYQENPKLVVIVL
NKDREWEKMGKWENRSLTLKFPVWPRFNSFGDAETDDNHLSIVTLEEKPFVIVENVERLT
GTCMRNSVPCRKHIKDNATEGGGTYIKKCCKGFCIDILKKIARNVKFTYDLYLVTNGKHG
KKINNVWNGMVGEVVNKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSP
SAFLEPFSASVWVMMFVMLLLVTAMAVFMFEYISPLGFNRNLAQGKDPHGPSFTMGKAVW
LLWGLVFNNSVPVQNPKGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLS
DNKFQSPYSYSPPFRFGTVPNGSTERNIRKNYPDMHQYMVKYHQTGVMDALVSLKTGKLD
AFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQVDLAILAIIGDG
EMEELEAQWLTGICHNEKNEVMSSQLDIDNMAGVFYMLATAMGLSLITFVWEHLFYWRLR
YCFTGVCSGTPGLLFTISRGIWSCIHGVHIDMKKKSPDLDFSPQANMLKLIKSAKQMTNM
TNLSGSRVNSPKRSGEFMHSAGPMIMDLMSEKGNFVYTDNRSYAQKDIYTDSSEIQSYLA
NRHKDHLNNYIFQGQHPLTLNESNPNTVEVAMSADAAQTAAKPRALWKKSVDTLRQSQTP
DMLVPDPRLSMKSQRYLPEEAAHSDISECSSRAASYKDPENNKHLKPKDSLKKRSMTSKY
PRDCSEVELSYLKNKQGGTGREKIYTIDSDRELSLHSEPMHYRENRGLAADDLDFPEMYS
DHNDNYRKCDQPIIHLNSSPLHHTDVDLLPDNVFNKHYSLKDKNLSPQESNDRYKQTHCR
SCLSKVPNYATGPYGPMRSPYNRCEACIHMCNLYDISEDQMLQEAMINPSIQQADDLFSN
YWPQTDGPHVQKRNKLRLSRQHSVDNIMLEKPKEVDLNRPARSVSLKEKDRLLEDGSFAN
LFSKSDKLFGSRSMLFNHNLEESKRSKSLYPDHTTDNPFMQAIRDDTRLVHGRSSSDIYK
QFAPIKARNENNLRSSVKSTASYCSRDGRIPNDLYISEHAMPYVANKTSAYSAPRVLSSS
QFSNRRVYKKIPSLESDV
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgtggttctccggcttggcactcctgacgctcccggctctcctcaccctggtgggcgta
gcgtacaccgccgagaaggttcccattctgaacattgccgtgatcctgggcngaacacgt
tacatctcggaccgggacatccgagccctgtggagcaaggacgacccgatcgacgtcaac
gtggtcacgctgctggtcaacgaaacggacccgaagagcatcatcactcatgtgtgcgac
ctcatgtccgggacaaagatccacggcgtggtgttcggcgacggcaccgaccaggaagcc
atcgcccagattttggattttatttcctcgcagacgttgatacccatcctggggattcac
ggcggatcgtccatgatcatggcagataaggacgtgaagtcgacgttcttccagtttggg
gcgtccattcagcaagaggcactgctgatgctgaacatcatggaggaatacgactggcac
gtgttctccattgtgacgagcaagttcccgggatatcaggacttcatcatgatcctcaag
accactgtggacaacagcttcgtaggatgggacctgcagcacaccatcacactagacgtg
gtggacggcgtggatggaggacggagtcagctccagctcaagagggtccagtcgcccgtc
atcctgctctactgctccaaagacgaagccgcatacatcctggaggaggcacgctcgctt
gggctcataggtttcggatacatctggattgttcccagtttgaccacaggcaacccggac
ataacgcccgaagagttcccgtccggtatgatctccgtctcgtacgatgactgggactat
cctctggaagcgcgggtccgagatgggctcgggatcatcaccacggcggctgcggccatg
ttgaaggagtttggagacattcctgaagccaagaccagctgctatgggcagatggagaag
gccaagctgccgccaagtgcacttcacaagtacatgatgaacgtgacctgggacggccgg
gacttgtccttcaccgaggacggctatcaggagaatcccaaactggtggttatcgtcttg
aacaaggaccgtgaatgggagaagatgggtaaatgggagaaccgcagtctgactctgaag
ttcccggtgtggccgcgcttcaactcgttcggcgacgcggagacggacgataatcacctg
agcatcgtgaccttagaggagaagcccttcgtgatcgtggagaatgtggagcgtctgacg
ggaacctgcatgcggaactcggttccctgccgcaagcacatcaaagacaatgccactgaa
ggaggaggaacctacatcaaaaagtgctgcaagggcttctgcatcgacatcctcaagaag
atcgccagaaacgtcaaattcacctatgacctatatttggtgaccaacgggaagcacggc
aagaagatcaataatgtctggaacggtatggtgggagaggtggtgaataagaaagccgtc
atggccgtgggctcactgacgatcaatgaggaacgctcggaggtcatcgatttctctgtt
ccctttgtggagacggggattagtgtgatggtgtcccgcagcaacggcaccgtctctccc
tccgctttcctggagcccttcagtgcttccgtgtgggtgatgatgtttgtcatgctgctc
ctggtcactgccatggccgtgttcatgttcgagtacatcagtcctctgggctttaacagg
aacctggcccagggcaaagaccctcacggaccttcattcaccatgggcaaggccgtgtgg
ctgctctggggtctggtcttcaacaactccgtcccggtgcagaaccccaaaggcaccacc
agcaagttcatcgtgtccgtgtgggccttcttcgctgtcatctttctggccagctacact
gccaacctggccgccttcatgatccaggaggagtttgtggaccaggtgactggtctcagt
gacaataagttccagagcccgtactcctactctcctcccttccgatttgggacggttcct
aacggcagcacggagaggaacattcgcaagaactacccggacatgcaccagtacatggtc
aagtatcatcagactggagtgatggacgcactggtcagcctgaagaccggcaaactggac
gcgtttatttacgatgcggccgtactgaactacatggctggcagggatgaaggctgcaag
ctggtgaccatcggaagtggctacatctttgctacgacgggttacggcattgctttacag
aagggctccccctggaaacgccaagtggacctggccatcctggccatcatcggggacggt
gaaatggaggagctggaggcccagtggctgaccggaatctgccacaatgaaaagaacgag
gtcatgagcagtcagctggatatagacaacatggccggggtattttacatgctggctacg
gcgatgggtcttagcctaatcacctttgtttgggagcatctgttctactggaggcttcgc
tactgcttcaccggcgtgtgttcaggaacgcctggcctgctcttcaccatcagcaggggt
atctggagttgcattcacggtgtccacattgacatgaagaagaagtcgcctgacttagat
ttcagccctcaggccaacatgctgaagcttatcaagtcagccaagcagatgacaaacatg
accaacctgagcggttcgagggttaattcgcccaaacgcagcggcgagttcatgcattcg
gccggccctatgatcatggatctgatgtcggagaaaggaaactttgtctacaccgataac
cgaagctatgctcaaaaagatatctataccgactccagtgaaatccagagttacctggct
aaccggcacaaagaccacctgaacaactacatcttccagggccaacacccacttacgctg
aatgagtccaaccccaacaccgtagaggtggctatgagtgcagatgcagctcaaactgct
gccaaacccagggctctttggaaaaagtctgtggatacgttacggcaaagccagacacct
gacatgctcgttccagacccccggctgtcaatgaagagtcagcgctacctgccagaggag
gcagcccactctgatatctctgagtgctcaagcagagccgcctcttacaaggatcctgag
aacaacaagcacctgaagcccaaggacagcttaaaaaaaagatcgatgacgtcaaaatac
cctagggattgcagcgaagtagagctgtcctacttaaaaaataagcagggcggaacagga
cgagaaaaaatctacaccatagactctgaccgggagctgagtctgcactcggaacccatg
cattaccgagaaaacagaggccttgcggccgacgatttggatttccccgaaatgtattcc
gaccataatgacaactatcgaaagtgtgaccagcccatcatccatttgaacagcagcccc
cttcatcatactgatgtggacctcctgccagacaatgtcttcaacaagcattacagcttg
aaggacaagaacctcagtccacaagagagcaacgatcgctacaaacagacacactgtcgg
agttgcctgtcaaaagtacccaactacgcgacaggaccgtacgggcccatgcgctcacct
tacaaccgctgcgaggcttgcatacacatgtgcaacttgtatgacattagcgaggatcaa
atgttgcaggaggccatgatcaatcccagcattcagcaagcagacgacttgttcagcaat
tactggccccagacggatgggcctcacgtgcagaagaggaacaagctacggctcagtcgt
cagcactctgtcgacaacatcatgctggagaaacccaaagaggttgacctcaacaggccg
gcacgtagcgtcagcctcaaagagaaggaccgcctcctagaggacggctcgtttgcgaac
ctgttcagcaagtccgacaaactgtttggcagcaggtccatgctctttaaccacaacctg
gaggagagcaagcgcagcaagtcgctttaccccgatcatacgacggacaaccccttcatg
caggcaatacgtgatgacacgcgcctggtccatggcaggagctcgtctgacatttacaaa
caatttgctcctatcaaagccaggaatgaaaacaatctgaggtcgtctgtcaagtccacc
gcttcatactgttccagagatggtcgaatacccaatgacttgtatatttcagagcatgcg
atgccttatgtagccaacaagacgagtgcatactcagctcctcgggtcctcagttcttct
cagtttagcaatagacgagtgtataagaaaatacctagccttgagtcagatgtttaa
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integrated database retrieval system
