Silurus meridionalis (southern catfish): 124397273
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Entry
124397273 CDS
T08004
Symbol
itga2b
Name
(RefSeq) integrin alpha-IIb isoform X1
KO
K06476
integrin alpha 2B
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04510
Focal adhesion
smeo04512
ECM-receptor interaction
smeo04810
Regulation of actin cytoskeleton
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124397273 (itga2b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124397273 (itga2b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
124397273 (itga2b)
04810 Regulation of actin cytoskeleton
124397273 (itga2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124397273 (itga2b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124397273 (itga2b)
04515 Cell adhesion molecules [BR:
smeo04515
]
124397273 (itga2b)
04090 CD molecules [BR:
smeo04090
]
124397273 (itga2b)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124397273 (itga2b)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124397273 (itga2b)
Cell adhesion molecules [BR:
smeo04515
]
Integrins
Integrin alpha subunits
124397273 (itga2b)
CD molecules [BR:
smeo04090
]
Proteins
124397273 (itga2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
124397273
NCBI-ProteinID:
XP_046722757
LinkDB
All DBs
Position
14:7650697..7669490
Genome browser
AA seq
1049 aa
AA seq
DB search
MEGISNGPFVIICFTASLFPLQGSTFNLDLINYHEFSGPKGSYFGFSVDFLKAKNQKVSI
VVGAPRDDVGPSTGGSVFHCPWNSLKQVCEKLNFDQSDDVNITFSKTLLTTHKSNQWLGA
TVRTYNSFILACAPLFHWNVFRDNDEATNTPVGNCQLLNMQTGMVANYAPCRGYEVEDFY
MKRNGYQDRRYCEAGFSADITEDGRVVLGAPGGFYFQGQIITAPVEYIMSSGRIFSPVHN
VIAEKATNEMMYHYDIYLGFSVAIGHFNADKIPDYVASVPLDLDSAGSVRIFSGDSYAYP
RFMMALKGFQVASYFGHCVAVTDINNDGRDDILVGAPLFMEHLSTHKLREVGQVYVYLQK
EGYRFSPKPVQTLSGTHTYGRFGITVASLGDINYDGFDDVAVGAPGAGEGGLVFIYMGKS
DGLNPQYVQVIKSPFQSLTSGFGFSIRGGTDIDNNGYPGFYFENVIVGAWGADKVAVYRS
KAVINTKAQLSFQPDFLHPDDKFCQMDGNPISCFNIMLCITVSGHKIPEEIVLNTEIQLD
KLKLNMARRTLLLESHHPYSHFQLTISRDKGTFCKNLTAYLLSEIKDKLSPIFISINYSL
ANTQEAMLHGQTVVVGQTRIVLDCGDDNICIPELKLEAKARTDPLLIGDDNPALLIITAE
NHGEGAYETELYVQLPPDTHYQGVLSDEKGFTELLCSPKKDNGSVIVVCELGNPMKANQM
IMAGLYFSMGGLEEVETHVSFFFQIKSKNSQNPDSNAVEVKINVQAAALLEMRGVSSPTE
CVLPIAKWNPNHPPQTLDDIGPLVEHVYELRNKGPSAVSAKLQIRFPVQQNGSYVFYVFA
NVSDELLTCSTNFSQIDLLWLDTGNTIDTTLAPVHHFNKREVEEQEEPVQHHRATVQVNC
ATDPCMEFSCEAPVLQRDARAVVRVAARLWVNYYLQSPYVNYVLLSTAHYEVVSTLSKIQ
PKFLLSGQAKTNTSVIWRSPDNHKEVPLRWIVVSILAGFLLLALLSIIFWKMGFFKRNRP
PADNDCDDPTHELKEEQSEYVDVSLNDKS
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggagggaataagcaacggtccttttgtcattatatgtttcacagccagtctttttcca
cttcagggaagtacctttaacctggatctgattaattatcatgaattttctgggcctaaa
ggaagttactttggtttttctgtggactttttgaaggcaaagaaccaaaaagtaagtatt
gtagtaggagcaccaagagatgatgtaggaccttccactggtggttctgtcttccactgt
ccctggaattcactcaaacaagtgtgtgaaaaactgaacttcgaccaatcagatgatgta
aacatcacatttagtaaaactctacttacaacccataaatctaaccagtggttgggagcc
acggttcgaacctacaacagctttatcttggcctgtgctccattattccactggaatgtg
tttcgggacaatgatgaggccacgaacacaccagtgggaaactgccagttactaaacatg
caaactggaatggtagcaaactatgccccatgtaggggatatgaagtggaagatttttac
atgaaaagaaacggctatcaagacaggcgctactgtgaggcaggatttagcgccgacatc
actgaggatggtagagtagttcttggtgctcctggcggattttacttccaaggtcagatc
attactgcacctgtggagtacatcatgtcaagtggcaggattttcagtccagtacacaat
gtaatagcagaaaaagcaacaaatgaaatgatgtaccattatgacatttatctgggcttc
tctgtggcaataggtcatttcaatgctgacaaaatcccagactatgtagccagtgtccca
cttgatctagactctgctggttctgtcagaatctttagtggagattcttatgcctacccc
agattcatgatggctttaaagggctttcaagtagcttcctattttggccactgtgttgct
gtgactgacataaacaatgatgggagggatgacatcctggtaggcgcacctctgtttatg
gagcatttgtccacacataagttgcgtgaggtaggccaggtgtacgtttacctgcagaag
gaaggttatcgcttttccccaaagccggtgcaaactttatcaggcactcatacttatgga
cgtttcggcatcaccgttgcttctttgggagacatcaactatgatggcttcgatgatgtg
gcagtaggggcaccaggcgctggcgaagggggtttggtgttcatctatatgggaaagagt
gatggtttgaacccgcaatatgtgcaagtcattaagagccctttccagtctctcacttca
ggatttggttttagcataagaggaggcacagacatcgacaacaatggatatccaggtttt
tattttgaaaatgttattgttggtgcatggggagctgataaagtggctgtatacaggtca
aaagctgtaataaacaccaaagctcagctttctttccaacctgatttcctacatcctgat
gataaattctgtcagatggatggcaatcccatttcctgctttaatatcatgctgtgcatt
actgtgtctgggcacaaaataccagaggagattgtgttgaacacagagatacagctggat
aaactaaagctaaatatggcgagacggaccctccttttggaatctcatcatccatacagc
cactttcagttgaccattagcagagacaaaggaacattttgtaagaatctcactgcatac
ttactgtcagagatcaaggacaagttgagcccaatctttatctcaattaactatagcttg
gccaacacccaagaagcaatgctacatggacaaactgtagtagttggtcagacacggatt
gttcttgactgcggtgatgataatatctgcatccctgaattgaagcttgaggccaaggca
cgcacagatcctctcctaattggggatgataacccagctctcctgatcatcactgctgag
aatcatggtgaaggagcatatgagacagaactgtatgtccagcttccacctgatacccac
tatcagggtgtgctaagtgatgagaagggcttcactgaacttctttgcagtccaaagaaa
gataatggttccgttattgtggtgtgtgaactgggcaacccaatgaaagctaaccagatg
atcatggctgggctgtatttcagcatgggtggactggaggaggttgagacccatgtgtcc
ttcttttttcaaattaaaagtaagaacagtcagaacccagacagcaatgcagtggaagtg
aagatcaatgttcaggctgcggctttgctggagatgcggggagtgtcctctcctactgag
tgcgtgctgccaattgccaaatggaatccaaaccaccccccccagactttggatgatatc
ggccccctcgtagagcatgtttatgagttaagaaataaagggccaagtgcagtcagtgcc
aagttgcagatacgtttcccagtgcagcagaatggctcttatgtgttctatgtgttcgcc
aacgtttcagatgaactcctgacgtgcagcacaaacttttctcaaattgatctgctctgg
cttgacacaggaaataccattgacaccactttggctcctgttcaccattttaacaaacgg
gaggtggaggaacaggaggagcctgttcagcatcacagagcaactgtgcaagtgaattgt
gccacagatccgtgtatggagttcagttgtgaggctccagttttacagagagacgccaga
gctgtagtgagagtggcggcccgcctgtgggtcaattactacttacaaagtccttatgta
aactatgtcctcttatcaactgctcactatgaggtagtaagcacactgtccaagatccag
ccaaaattcttgctcagtggacaagcaaagacaaacaccagcgtgatttggaggtctcct
gataaccataaggaagtgccacttcggtggattgtggtgtccatattggctggcttcttg
ctcctcgctttgttaagcatcatcttctggaagatgggatttttcaagcgcaaccgtcca
ccagctgataatgactgtgatgatcccactcacgagctgaaagaagagcaatctgagtat
gttgatgtttcattaaacgataagtcctga
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