Silurus meridionalis (southern catfish): 124397357
Help
Entry
124397357 CDS
T08004
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124397357 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124397357 (lrrc4ba)
Cell adhesion molecules [BR:
smeo04515
]
Immunoglobulin superfamily
NGL family
124397357 (lrrc4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
ig
LRR_9
V-set
LRRNT
Ig_2
LRR_EndoS
DUF7617
Motif
Other DBs
NCBI-GeneID:
124397357
NCBI-ProteinID:
XP_046722891
LinkDB
All DBs
Position
14:1365811..1406062
Genome browser
AA seq
728 aa
AA seq
DB search
MRITTVTGLPNPAPFFFLLAQLLFWLLLLGQDFAGATSTCPTPCSCSNQASRVICTRRNL
DEVPENISNNTRYLNLQENSIQVIRSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDY
ISDAAFVGLVNLRYLNLGMCGLKDIPNLTPLIRLEELELSGNKLEIIRPGSFQGLESLRK
LWLMHSQMSVIERNAFDDLKSLEELNLSHNSLHSLPHDLFTPLQKLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPYLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTGTSMTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNSAGNTTATAVLNVTAADTSVNYTYFSTVTVETVESTGEEDSALRSINETIIHIPGPT
PSGHLWHDGIPTTASSLSVFESSSSPRATKPTFTVAVSEPSYPTGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINMEDEINASASVRGSGISGGSTLP
QAGSSGGGQSLRLHHPEIVNLPNLARSDHLNHYYKPHHFNNNMMSLGLSGGSGIGLNNNN
NPCSQAQPTQISCSQVPVSVSSIPSSMPLPTLGIHGSLKGLMGKGQNPQIEPLLFKSGSK
ENVQETQI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcaccacggtgaccggccttcctaaccccgcccccttctttttcctattggcc
cagctgctgttttggctcctcctcctgggccaagactttgccggagccacgtcgacctgc
ccgacaccttgcagctgctccaatcaggcaagccgggtcatctgtacgagacgaaacctg
gacgaggttcctgaaaatatatccaacaacacgcgatacctcaacttacaggagaactcg
atacaggtgataagatcagataccttcaagcatttgcgacacttggagatcctccagctt
tccaagaaccagattcgtcaaattgaagttggtgcgttcaatggcctcccaaacctcaac
actttggaactgtttgacaaccgtctcacgctggtgccatcacaagcgttcgagtatctc
agcaagcttcgggagctctggcttcgaaacaaccccatcgagactttgccaggctatgcc
ttccaccgcgtgccctcccttcgtcgtctcgatctgggtgagctcaaaaagctggactac
atttcagatgctgcctttgtcggccttgtcaatctgcgctaccttaacctgggcatgtgt
ggtcttaaggacatccccaacctgacacctctgatccggttggaggagctggagctgtct
ggaaataagctggaaatcataagacctggatcattccaaggcctggagtctttgcgcaaa
ctgtggcttatgcactcccagatgtctgtcatagaacgcaatgcatttgacgacctcaag
agtctggaggagttgaatctttcccacaattctctgcattcgctgccccatgacctcttt
accccactgcaaaagctagagagagtacacctcaaccacaatccttgggtgtgtaattgc
gatgtactttggcttagctggtggctgaaagaaaccgtaccaagtaacacgacttgctgt
gctcggtgccatgcaccaccctacctgaagggcaagtacattggagagctggaccaaagc
cacttcacgtgctacgcccctgttatcgttgagccacccactgacctcaacgtgactgaa
ggcatggctgcagaactcaagtgccgtactggaacctccatgacgtctgtgaactggatt
acacccaatggaaccctgatgactcatggatcataccgagtccggatctctgtgctacac
gatggaactctgaattttactaatgtcaccttgcgagacactggtcagtacacctgcatg
gtgaccaactcagctggcaataccacagcaactgctgttttgaatgtcactgctgcagac
accagtgtcaattacacttacttttccaccgtcactgttgaaactgtagaatccactgga
gaagaggactcagccctacgttccattaacgagactattattcacatccctggtcctaca
ccttctggacacctctggcatgatggcatcccaacaacagcttcctcgctatcagttttt
gaatcttcatcttctccgcgagcaaccaaacctacgtttactgttgcggtctctgagcca
agctaccccacaggtctagatgatgtaatgaagactaccaagatcattattggctgcttt
gtcgccatcacctttatggcagctgtcatgttggtggtcttctacaagctgagaaagcag
caccagttgcacaagcaccacggaccagcaagagccatcgaaattatcaacatggaggac
gagatcaacgctagtgccagcgtccgtggaagcgggatctctggtggttccaccttgccc
caggccggatccagtggaggaggccagagcttgcggctgcatcacccggagattgtcaac
ctccccaacttggctcggtcggaccaccttaaccactactacaagccccaccacttcaac
aacaacatgatgagcttggggctctccggaggctctgggattggcctcaacaacaacaac
aacccctgttcccaagcccaacccacacaaatttcctgttcccaggttcctgtctcagtg
agctccattccatcctcaatgcctctgcctaccctcggcatccacggatccctgaaaggc
ctaatggggaaggggcagaaccctcaaatcgagcctttactcttcaagagtggctccaaa
gagaatgtccaagagactcagatctga
DBGET
integrated database retrieval system
