Silurus meridionalis (southern catfish): 124397387
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Entry
124397387 CDS
T08004
Symbol
rnf44
Name
(RefSeq) RING finger protein 44 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124397387 (rnf44)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124397387 (rnf44)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124397387 (rnf44)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
VPS18_RING_C
zf-RING_16
RING_XB3-XBAT31
zf-RING-like
zinc_ribbon_16
zf-C3H2C3
Prok-RING_4
FANCL_C
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
124397387
NCBI-ProteinID:
XP_046722941
LinkDB
All DBs
Position
14:20974897..20990552
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AA seq
441 aa
AA seq
DB search
MRPWEISVNRRPPTAPLNHRSFIGGPCNAPVHLRRSPPGRWQWGQRDRAAVHASLRQDEN
FPHASFPQQQQSQAVPVEEARQYSQAGVPPRMLHPSTHPPQQTSIMVDLHEQMHQGSVPI
SYTVTTVTTHGFPMHTGQPIPACNAQQLPACSVMFSGQLSLLCCLPPPLIQGCTVPLPVS
YQAFPPLISSEPFLLHTSPPVAPHQPLGPLSHFIPLQPQHPRMPLQRVENEVDLRGEQHH
LGTFSYPAAHHPPAAMPPSVPLQYHLPQEPLHQELPFAVPYPHMLPRRGSGQRYRLQQPL
PPPPPPPPYYPGFLPYFLSMLPVPPTAVGPAISLDLDVDDVEMENYEALLNLAERLGEAK
PRGLTKADIEQLPSYRFNSEKHQSEQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWL
KTNRTCPICRADASEVHRDVE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccatgggaaatatctgtgaataggcggccgccaacagcccccttaaaccatagg
agcttcatcgggggtccttgcaacgcgcccgtgcacctcaggagaagtcctccagggcgc
tggcagtgggggcagcgagaccgagcggctgtgcacgcttccctgcggcaggatgagaat
tttccccacgcctcattcccgcagcagcagcagagccaagccgttcctgtagaggaggcg
aggcagtacagccaagccggcgtgccgccccgcatgctccacccatccacacatccaccg
cagcagacctccatcatggtggaccttcatgaacaaatgcaccaaggatccgttccgatc
tcttacacagttaccacggtgacgacccacggcttcccaatgcacacgggccagccgatc
ccggcatgcaacgcgcagcagctcccagcatgctcggtaatgttcagcggacagctctct
ctgctctgctgccttcctcctcctctaatccaggggtgcaccgtgcccttacctgtgtct
taccaggcctttccgcctctgatctccagcgagccttttcttctgcacacgagccctccg
gtggcgcctcatcagccactggggccactcagccacttcatccccctgcagcctcagcat
ccgcgcatgcctctgcaaagagtggagaacgaggtggacctgagaggagagcagcaccat
ttgggaacgttctcgtaccctgcggctcatcacccaccagcagccatgcccccctccgtg
cccctgcagtaccacctgccccaggaaccgctacaccaggagctgccctttgcggtgccg
tatccacacatgctgcccagacgtgggagtggccagaggtatcgcttacaacagccactg
cctcctccgccccctcctccgccctactaccccggcttcctcccttacttcctctcgatg
cttcctgtacccccgactgctgtgggtcctgctatcagtttggacctggacgtggacgac
gtggagatggagaattacgaagcgttactgaacctcgcggagcgactcggagaagccaaa
cccagaggactgacgaaagccgacatcgaacagcttccgtcctacaggtttaactcggaa
aaacaccaatcagaacagaccctgtgcgtcgtgtgctttagcgatttcgaatcaaggcag
ctacttcgagtattaccctgtaatcacgagtttcacgccaagtgcgtggacaagtggtta
aagaccaaccgcacctgtccgatctgccgcgcggacgcttccgaagttcaccgtgacgtg
gagtga
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