Silurus meridionalis (southern catfish): 124397547
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Entry
124397547 CDS
T08004
Symbol
zmat2
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124397547 (zmat2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124397547 (zmat2)
Spliceosome [BR:
smeo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
124397547 (zmat2)
Complex C
U4/U6.U5 tri-SnRNP related factors
124397547 (zmat2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_jaz
zf-met
zf-U1
SNRNP27
DUF4250
MG280
C2H2-zf_KIN17
Cgr1
Herpes_gp350_A
zf-C2H2
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
124397547
NCBI-ProteinID:
XP_046723041
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Position
15:complement(17870031..17877554)
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AA seq
207 aa
AA seq
DB search
MAGRGSASNMASGSGAKNDFRRKWDKDEYEQLAQKRITEEREKKDGKLVPPVKRELLRHR
DYKVDLESKLGKTIVITKTTPQAEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSM
RVERSSLDQVKKRFEVNKKKLEEKQKEYDFEERMKELREEEEKAKAYKKEKLKEKKRKAE
EDLNFEDDDEMAAVMGFTGFGSSKKGH
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaagaggatccgcgagcaacatggcgtccggcagtggtgcaaagaatgatttt
cggcgcaagtgggataaagatgagtacgagcaactggctcaaaagcgaatcacggaggag
agagagaaaaaagatggcaaacttgtccccccagtcaaacgagagctcctccggcacaga
gactacaaggtggatttggagtctaagctcggaaaaaccatcgtcatcactaaaactact
ccacaggctgagatgggcgggtactattgtaatgtttgcgattgtgttgtgaaagactcc
atcaacttcttggatcacatcaatggcaagaagcaccagaggaacttgggaatgtcaatg
cgagtggaacgctcctcgttggaccaagttaagaagcgttttgaggttaacaagaaaaag
ctggaggaaaaacagaaggagtacgattttgaagagcgaatgaaggaattgcgagaagag
gaggaaaaagcaaaagcatacaaaaaagaaaagcttaaagaaaagaaaagaaaggcagag
gaagacctgaattttgaagacgatgatgaaatggctgctgtaatgggattcacagggttc
ggttcatccaaaaagggccactaa
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