Silurus meridionalis (southern catfish): 124397551
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Entry
124397551 CDS
T08004
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03030
DNA replication
smeo03410
Base excision repair
smeo03420
Nucleotide excision repair
smeo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124397551 (rfc2)
03410 Base excision repair
124397551 (rfc2)
03420 Nucleotide excision repair
124397551 (rfc2)
03430 Mismatch repair
124397551 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smeo03032
]
124397551 (rfc2)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124397551 (rfc2)
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124397551 (rfc2)
DNA replication proteins [BR:
smeo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124397551 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
124397551 (rfc2)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124397551 (rfc2)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124397551 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
124397551 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
RCF1-5-like_lid
AAA_16
Mg_chelatase
Viral_helicase1
AAA_24
AAA_11
Rad17
RuvB_N
AAA_assoc_2
AAA_19
nSTAND3
MipZ
AAA_18
ABC_tran
AAA_5
AAA_28
DNAX_ATPase_lid
AAA_23
AAA_25
AAA_30
MeaB
SLFN-g3_helicase
NTPase_1
RNA_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
124397551
NCBI-ProteinID:
XP_046723045
LinkDB
All DBs
Position
15:complement(16866104..16871413)
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AA seq
353 aa
AA seq
DB search
MDVEMKEADGEQSQTDAQSNKKEEAPRSSTSTYELPWVEKYRPLKLNEIVGNEETVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYSKLRDEQIMMRLMEVVEKENLHTTNDGLEAIIFTAQGDMRQALNNLQSTHS
GFGFINSENVFKVCDEPHPLLVKSMLEHCVNANIDEAYKIISQLWSLGYSPEDIIGNIFR
VCKTFQMPEYLKLEFIKEIGYTHMRIAEGVNSLLQLAGLLGRLCSKTALPEAS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggagatgaaagaagctgatggtgaacaaagtcaaacagatgcacagagtaat
aaaaaagaagaggctccgaggtcttcgacgagcacttatgaactcccctgggttgaaaaa
tacagaccactgaagctgaatgaaatcgttggaaatgaagaaactgtcagcagactggag
gtgtttgccagagagggaaacgtacccaatatcattattgctggtcctcctggcactgga
aaaacaacaagcattttgtgtttggctcgagctcttctgggccctgcaatgaaggacgcg
gtgcttgagttgaatgcctcaaatgatcgaggtattgatgttgttcgaaacaagatcaag
atgtttgcccagcaaaaagttactcttcccaaaggacgtcacaaaatcatcattctggat
gaagctgacagcatgactgatggagcacagcaagctctgagaagaacaatggagatctat
tcgaagaccacccgatttgctttggcctgcaatgcatcagataaaattatagaaccgatt
cagtcacgctgtgccgtgctgcgctacagtaaactgcgggatgaacagattatgatgcgg
ctaatggaggtagtagagaaggagaatttgcacaccaccaatgatggactggaggccatt
attttcacagcccaaggagacatgagacaggcactcaacaacctgcagtccacccattct
ggatttggttttatcaacagtgaaaatgtgttcaaggtatgtgatgagccacaccccctg
ctggttaaaagcatgcttgagcactgcgtaaacgcaaacatcgacgaggcttacaagata
atatcacagctttggtcacttggctactctcctgaagatataatagggaacatctttaga
gtgtgtaagaccttccagatgcctgagtacctgaagctggagtttatcaaggagattggc
tacacccacatgaggatagcagaaggagtaaattctctcctccagcttgctgggctgttg
ggacgtctctgcagtaagactgcactacccgaggccagctaa
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